Structural and Functional Characterization of a GH64 β-1,3-Glucanase from <i>Massilia violaceinigra</i> Reveals an Exolike Endocleavage Mode for Laminaripentaose Production

β-1,3-Glucans are widespread in plants, algae, fungi, and certain bacteria, and their enzymatic hydrolysis yields β-1,3-gluco-oligosaccharides (GOS) with diverse biological activities. However, the structural heterogeneity of GOS mixtures complicates investigations of their structure-activity relationships. Members of glycoside hydrolase family 64 (GH64) are unique in that, despite being classified as endo-β-1,3-glucanases, they predominantly produce a single product─laminaripentaose. Here, we biochemically characterized a GH64 enzyme, <i>Mv</i>gh64, from <i>Massilia violaceinigra</i>. <i>Mv</i>gh64 exhibited high specificity toward β-1,3-glucans and produced laminaripentaose as the major product (>85%). Structural analysis via X-ray crystallography, coupled with GPC and MS analysis of the products, revealed features indicative of an exolike endo cleavage mechanism, including a tunnel-like active site formed by region 1 and loop 1. These findings provide mechanistic insight into GH64 substrate specificity and establish a framework for engineering glycosidases to produce uniform, high-degree-of-polymerization oligosaccharides.

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Journal
Journal of Agricultural and Food Chemistry
Published
2025-12-26
DOI
https://doi.org/10.1021/acs.jafc.5c10137
Primary Topic
Polysaccharides and Plant Cell Walls
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article
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article

Structural and Functional Characterization of a GH64 β-1,3-Glucanase from Massilia violaceinigra Reveals an Exolike Endocleavage Mode for Laminaripentaose Production

Tang Li, Kuikui Li, Heng Aie Yin, Xiaojing Zhang
Journal of Agricultural and Food Chemistry
Polysaccharides and Plant Cell Walls
article

Structural and Functional Characterization of a GH64 β-1,3-Glucanase from Massilia violaceinigra Reveals an Exolike Endocleavage Mode for Laminaripentaose Production

Tang Li, Kuikui Li, Heng Aie Yin, Xiaojing Zhang
article en

Abstract

β-1,3-Glucans are widespread in plants, algae, fungi, and certain bacteria, and their enzymatic hydrolysis yields β-1,3-gluco-oligosaccharides (GOS) with diverse biological activities. However, the structural heterogeneity of GOS mixtures complicates investigations of their structure-activity relationships. Members of glycoside hydrolase family 64 (GH64) are unique in that, despite being classified as endo-β-1,3-glucanases, they predominantly produce a single product─laminaripentaose. Here, we biochemically characterized a GH64 enzyme, <i>Mv</i>gh64, from <i>Massilia violaceinigra</i>. <i>Mv</i>gh64 exhibited high specificity toward β-1,3-glucans and produced laminaripentaose as the major product (>85%). Structural analysis via X-ray crystallography, coupled with GPC and MS analysis of the products, revealed features indicative of an exolike endo cleavage mechanism, including a tunnel-like active site formed by region 1 and loop 1. These findings provide mechanistic insight into GH64 substrate specificity and establish a framework for engineering glycosidases to produce uniform, high-degree-of-polymerization oligosaccharides.

Journal of Agricultural and Food ChemistryVol. 74(1)
Chinese Academy of Sciences (CN), Dalian University (CN), University of Chinese Academy of Sciences (CN)
Openalex Percentile: Top 24%
Polysaccharides and Plant Cell Walls
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Structural and Functional Characterization of a GH64 β-1,3-Glucanase from <i>Massilia violaceinigra</i> Reveals an Exolike Endocleavage Mode for Laminaripentaose Production — Tang Li, Kuikui Li, et al. · Journal of Agricultural and Food Chemistry (2025) | TGRS Research Map | TGRS