Effects of environmental factors on arsenic accumulation in rice under field conditions using a Bayesian state space model

Rice (Oryza sativa L.) is a major dietary source of arsenic (As) for humans. Understanding the mechanisms of As accumulation in rice is essential for mitigating human exposure. However, the effects of environmental factors on As accumulation in rice have been insufficiently quantified under field conditions. To address these issues, we modeled temporal dynamics of As accumulation in rice plants and grains using a Bayesian state-space model (SSM). In this SSM, As concentrations in flag leaves and rice grains were treated as response variables, whereas four environmental factors, i.e., number of flooding days, temperature, crop evapotranspiration and precipitation, served as explanatory variables. The nonlinear effects of physiological factors were also incorporated into the SSM. The results indicated that among the four environmental factors, flooding days exerted the greatest positive effect on As accumulation in rice plants, with the effect peaking 5-10 days after heading. High temperatures and increased crop evapotranspiration promoted As accumulation, whereas increased precipitation reduced As accumulation. This work is among the first studies to quantify the effects of environmental factors on As accumulation in rice under field conditions, and the findings contribute to the development of region-specific cultivation guidelines for mitigating As exposure through rice.

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Publication Details

Journal
Scientific Reports
Published
2025-12-26
DOI
https://doi.org/10.1038/s41598-025-33897-5
Primary Topic
Arsenic contamination and mitigation
Type
article
Field-Weighted Citation Impact
0.00

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article

Effects of environmental factors on arsenic accumulation in rice under field conditions using a Bayesian state space model

Ken Nakamura, Shigeki Kishi, Keisuke Ono, Ikuko Akahane et al.
Scientific Reports
Arsenic contamination and mitigation
article

Effects of environmental factors on arsenic accumulation in rice under field conditions using a Bayesian state space model

Ken Nakamura, Shigeki Kishi, Keisuke Ono, Ikuko Akahane, Satoru Ishikawa, Koji Baba, Kochi Ishito, Noriko Yamaguchi
article en

Abstract

Rice (Oryza sativa L.) is a major dietary source of arsenic (As) for humans. Understanding the mechanisms of As accumulation in rice is essential for mitigating human exposure. However, the effects of environmental factors on As accumulation in rice have been insufficiently quantified under field conditions. To address these issues, we modeled temporal dynamics of As accumulation in rice plants and grains using a Bayesian state-space model (SSM). In this SSM, As concentrations in flag leaves and rice grains were treated as response variables, whereas four environmental factors, i.e., number of flooding days, temperature, crop evapotranspiration and precipitation, served as explanatory variables. The nonlinear effects of physiological factors were also incorporated into the SSM. The results indicated that among the four environmental factors, flooding days exerted the greatest positive effect on As accumulation in rice plants, with the effect peaking 5-10 days after heading. High temperatures and increased crop evapotranspiration promoted As accumulation, whereas increased precipitation reduced As accumulation. This work is among the first studies to quantify the effects of environmental factors on As accumulation in rice under field conditions, and the findings contribute to the development of region-specific cultivation guidelines for mitigating As exposure through rice.

Scientific ReportsVol. 16(1)
National Agriculture and Food Research Organization (JP), Research Center for Agricultural Information Technology (JP), National Institute for Agro-Environmental Sciences (JP), Central Region Agricultural Research Center (JP), Advanced Analysis Center (JP)
Ministry of Agriculture, Forestry and Fisheries, National Institute for Agro-Environmental Sciences
Life in Land
Openalex Percentile: Top 38%
Arsenic contamination and mitigation
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