Genomic, Evolutionary and Phenotypic Insights into Pseudomonas Phage Adele, a Novel Pakpunavirus with Potential for Phage Therapy
Bacteriophages are powerful drivers of microbial evolution and are increasingly explored as alternatives to antibiotics against multidrug-resistant pathogens such as <i>Pseudomonas aeruginosa</i>. Here, we describe the isolation, phenotypic characterization and genomic, structural and evolutionary analysis of <i>Pseudomonas</i> phage Adele, a lytic myovirus representing a novel species within the genus <i>Pakpunavirus</i> (family <i>Vandenendeviridae</i>). Phage Adele exhibits a short latent period of 20 min, a burst size of 59 ± 11 virions per infected cell and a high virulence index, efficiently lysing non-O11 <i>Pseudomonas aeruginosa</i> strains and reducing biofilm biomass. In vivo, Adele confers marked protection in a <i>Galleria mellonella</i> infection model. Phylogenetic reconstruction, synteny analysis and structural modeling demonstrate the relatedness of <i>Vandenendeviridae</i> to phages of the <i>Andersonviridae</i> and <i>Vequintavirinae</i> clades, pointing to a stable, ancestral virion architecture that has undergone lineage-specific elaborations, including the duplication and divergence of tail tube proteins. The tail assembly chaperone gene employs a conserved -1 programmed ribosomal frameshift. Phage Adele encodes an elaborate set of metabolic reprogramming and anti-defense systems, reflecting extensive horizontal gene transfer. The combination of a conserved structural architecture and mosaic genome establishes Adele as an exemplary system for studying modular evolution in phages, alongside its demonstrated therapeutic efficacy.
Authors
- Maria Leont’eva (ORCID: https://orcid.org/0000-0002-9402-4251)
- Б. А. Ефимов (ORCID: https://orcid.org/0009-0003-8879-6516)
- Konstantin S. Troshin (ORCID: https://orcid.org/0009-0004-5018-1265)
- Л. И. Кафарская
- Peter V. Evseev (ORCID: https://orcid.org/0000-0002-1646-9802)
- Н. Н. Сыкилинда
- Konstantin Miroshnikov
- Anna A. Vasilyeva
- George A. Skvortsov
- Artem A. Malkov
- Sergei K. Komarevtsev
- Mikhail A. Yaitsky
- Andrei V. Chaplin
- Dmitriy A. Shagin
Institutions
- Pirogov Russian National Research Medical University (RU)
- Institute of Bioorganic Chemistry (RU)
Publication Details
- Journal
- Viruses
- Published
- 2025-12-25
- DOI
- https://doi.org/10.3390/v18010042
- Primary Topic
- Bacteriophages and microbial interactions
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Ministry of Science and Higher Education of the Russian Federation