Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation

Plants rely on rapid proteome remodeling to withstand fluctuating environmental conditions, yet how the ubiquitin system dynamically coordinates these multilayered responses remains unclear. Here we define the in vivo proximity interactome of ARABIDOPSIS SKP1-LIKE 1 (ASK1), the core adaptor of SCF ubiquitin ligases, under acute abscisic acid (ABA) signaling and prolonged drought. TurboID-based proximity labeling coupled with quantitative proteomics revealed that ASK1 assembles highly condition-specific protein networks, distinguishing canonical SCF modules from broader noncanonical associations with transcriptional, chromatin, translational, vesicle-trafficking, and proteostasis machinery. Acute ABA exposure rapidly recruits F-box proteins and ABA-responsive transcription factors while engaging ribosomal and chromatin modules, whereas drought drives ASK1 into expanded proteostasis and stress-signaling assemblies, including chaperone-cochaperone systems, transcriptional repressors, and autophagy-endomembrane components. Global proteomics shows that ASK1 overexpression enhances accumulation of drought-protective and ABA-responsive proteins while repressing immune and ROS-scavenging pathways, indicating a shift in resource allocation. Together, these results describe ASK1 as a multifunctional proteostasis and signaling hub that integrates SCF-dependent and SCF-independent pathways to coordinate transcriptional, translational, and proteolytic reprogramming during plant adaptation to stress.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2025-12-25
DOI
https://doi.org/10.64898/2025.12.22.696057
Primary Topic
Endoplasmic Reticulum Stress and Disease
Type
article
Field-Weighted Citation Impact
0.00

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article

Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation

Nitzan Shabek, Christian Montes, Natalie Hamada, Justin W. Walley et al.
bioRxiv (Cold Spring Harbor Laboratory)
Endoplasmic Reticulum Stress and Disease
article

Dynamic ASK1 proximity networks uncover SCF-dependent and noncanonical roles in ABA and drought adaptation

Nitzan Shabek, Christian Montes, Natalie Hamada, Justin W. Walley, Andrew Groover, Jacob Moe-Lange, Shikha Malik, F. Daniela Rodriguez-Zaccaro
article en

Abstract

Plants rely on rapid proteome remodeling to withstand fluctuating environmental conditions, yet how the ubiquitin system dynamically coordinates these multilayered responses remains unclear. Here we define the in vivo proximity interactome of ARABIDOPSIS SKP1-LIKE 1 (ASK1), the core adaptor of SCF ubiquitin ligases, under acute abscisic acid (ABA) signaling and prolonged drought. TurboID-based proximity labeling coupled with quantitative proteomics revealed that ASK1 assembles highly condition-specific protein networks, distinguishing canonical SCF modules from broader noncanonical associations with transcriptional, chromatin, translational, vesicle-trafficking, and proteostasis machinery. Acute ABA exposure rapidly recruits F-box proteins and ABA-responsive transcription factors while engaging ribosomal and chromatin modules, whereas drought drives ASK1 into expanded proteostasis and stress-signaling assemblies, including chaperone-cochaperone systems, transcriptional repressors, and autophagy-endomembrane components. Global proteomics shows that ASK1 overexpression enhances accumulation of drought-protective and ABA-responsive proteins while repressing immune and ROS-scavenging pathways, indicating a shift in resource allocation. Together, these results describe ASK1 as a multifunctional proteostasis and signaling hub that integrates SCF-dependent and SCF-independent pathways to coordinate transcriptional, translational, and proteolytic reprogramming during plant adaptation to stress.

bioRxiv (Cold Spring Harbor Laboratory)
Iowa State University (US), Carnegie Department of Plant Biology (US), Northern Research Station (US), University of California, Davis (US)
National Science Foundation, U.S. Department of Energy, U.S. Department of Agriculture, National Institutes of Health, Office of Science, University of California, Davis, Plant Sciences Institute, Iowa State University, Biological and Environmental Research
Openalex Percentile: Top 34%
Endoplasmic Reticulum Stress and Disease
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