Karstmycins A–H: Trichostatin Analogues with PTP1B Inhibitory Activities from <i>Streptomyces</i> sp. DX6D14
Eight pairs of undescribed trichostatin analogue enantiomers, (±)-karstmycins A-H (<b>1a</b>/<b>1b</b>-<b>8a</b>/<b>8b</b>), and three new enantiomers (<b>9a</b>-<b>11a</b>) together with five known analogues (<b>9b</b>-<b>11b</b>, <b>12</b>, and <b>13</b>) were isolated from karst cave-derived <i>Streptomyces</i> sp. DX6D14. The structures and absolute configurations of the new compounds were determined by extensive spectroscopic analysis, as well as nuclear magnetic resonance chemical shifts, optical rotation, and electronic circular dichroism calculations. Compounds <b>1</b> and <b>2</b> were rare trichostatins featuring a nitrile group, and compounds <b>3</b>-<b>5</b> were characterized by a unique piperidin-2-one moiety at the end of the branched C<sub>7</sub> side chain. Compounds <b>3a</b> and <b>3b</b> showed PTP1B inhibitory activity with IC<sub>50</sub> values of 27 ± 2 and 12 ± 2 μM, respectively, compared to the positive control, sodium orthovanadate (IC<sub>50</sub>: 14 ± 1 μM). A kinetic study indicated that the most potent compound <b>3b</b> was a mixed-type inhibitor for PTP1B. Molecular docking simulation revealed that <b>3b</b> simultaneously interacted with the catalytic site and the peripheral site of PTP1B.
Authors
- Du‐Qiang Luo (ORCID: https://orcid.org/0000-0002-0885-3943)
- Z. Wang
- Jiao-Cen Guo
- Qing‐Yun Ma
- Fang Bao Zhu
- Qingyi Xie
- Hao-Fu Dai
- Jing-Zhe Yuan (ORCID: https://orcid.org/0000-0002-2272-7265)
- You-Xing Zhao
- Wen-Jun Li
- Li Yang
- Qing Liu
Institutions
- Chinese Academy of Tropical Agricultural Sciences (CN)
- Biocon (Switzerland) (CH)
- Chinese Academy of Sciences (CN)
- Institute of Ecology and Geography (MD)
- Key Laboratory of Guangdong Province (CN)
- Tropical Bioscience and Biotechnology Research Institute (CN)
- Hebei University (CN)
Publication Details
- Journal
- Journal of Natural Products
- Published
- 2025-12-24
- DOI
- https://doi.org/10.1021/acs.jnatprod.5c01185
- Primary Topic
- Microbial Natural Products and Biosynthesis
- Type
- article
- Field-Weighted Citation Impact
- 0.00