Radiomic-Based Machine Learning Classifiers for HPV Status Prediction in Oropharyngeal Cancer: A Systematic Review and Meta-Analysis

<b>Background:</b> The aim of the present systematic review (SR) is to compile evidence regarding the use of radiomic-based machine learning (ML) models for predicting human papillomavirus (HPV) status in oropharyngeal squamous cell carcinoma (OPSCC) patients and to assess their reliability, methodological frameworks, and clinical applicability. The SR was conducted following PRISMA 2020 guidelines and registered in PROSPERO (CRD42025640065). <b>Methods</b>: Using the PICOS framework, the review question was defined as follows: "Can radiomic-based ML models accurately predict HPV status in OPSCC?" Electronic databases (Cochrane, Embase, IEEE Xplore, BVS, PubMed, Scopus, Web of Science) and gray literature (arXiv, Google Scholar and ProQuest) were searched. Retrospective cohort studies assessing radiomics for HPV prediction were included. Risk of bias (RoB) was evaluated using Prediction model Risk Of Bias ASsessment Tool (PROBAST), and data were synthesized based on imaging modality, architecture type/learning modalities, and the presence of external validation. Meta-analysis was performed for externally validated models using MetaBayesDTA and RStudio. <b>Results</b>: Twenty-four studies including 8627 patients were analyzed. Imaging modalities included computed tomography (CT), magnetic resonance imaging (MRI), contrast-enhanced computed tomography (CE-CT), and <sup>18</sup>F-fluorodeoxyglucose positron emission tomography (<sup>18</sup>F-FDG PET). Logistic regression, random forest, eXtreme Gradient Boosting (XGBoost), and convolutional neural networks (CNNs) were commonly used. Most datasets were imbalanced with a predominance of HPV+ cases. Only eight studies reported external validation results. AUROC values ranged between 0.59 and 0.87 in the internal validation and between 0.48 and 0.91 in the external validation results. RoB was high in most studies, mainly due to reliance on p16-only HPV testing, insufficient events, or inadequate handling of class imbalance. Deep Learning (DL) models achieved moderate performance with considerable heterogeneity (sensitivity: 0.61; specificity: 0.65). In contrast, traditional models provided higher, more consistent performance (sensitivity: 0.72; specificity: 0.77). <b>Conclusions</b>: Radiomic-based ML models show potential for HPV status prediction in OPSCC, but methodological heterogeneity and a high RoB limit current clinical applicability.

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Journal
Diagnostics
Published
2025-12-24
DOI
https://doi.org/10.3390/diagnostics16010068
Citations
1
Primary Topic
Radiomics and Machine Learning in Medical Imaging
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article
Field-Weighted Citation Impact
1.36

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article

Radiomic-Based Machine Learning Classifiers for HPV Status Prediction in Oropharyngeal Cancer: A Systematic Review and Meta-Analysis

Luiz Paulo Kowalski, Pawel Jerzy Golusiński, Nabil Saba, Alan Roger Santos-Silva et al.
1 citations
Diagnostics
Radiomics and Machine Learning in Medical Imaging
1.36
article

Radiomic-Based Machine Learning Classifiers for HPV Status Prediction in Oropharyngeal Cancer: A Systematic Review and Meta-Analysis

Luiz Paulo Kowalski, Pawel Jerzy Golusiński, Nabil Saba, Alan Roger Santos-Silva, Remco de Bree, Anna Luíza Damaceno Araújo, Andrés Coca-Pelaz, Robert P. Takes, Karthik N. Rao, Brendo Vinícius Rodrigues Louredo, Deivid Cabral, Cristina Saldivia-Siracusa, Alfio Ferlito, Otávio Augusto A. M. de Melo, Orlando Guntinas-Lichius
article en
1 citations

Abstract

<b>Background:</b> The aim of the present systematic review (SR) is to compile evidence regarding the use of radiomic-based machine learning (ML) models for predicting human papillomavirus (HPV) status in oropharyngeal squamous cell carcinoma (OPSCC) patients and to assess their reliability, methodological frameworks, and clinical applicability. The SR was conducted following PRISMA 2020 guidelines and registered in PROSPERO (CRD42025640065). <b>Methods</b>: Using the PICOS framework, the review question was defined as follows: "Can radiomic-based ML models accurately predict HPV status in OPSCC?" Electronic databases (Cochrane, Embase, IEEE Xplore, BVS, PubMed, Scopus, Web of Science) and gray literature (arXiv, Google Scholar and ProQuest) were searched. Retrospective cohort studies assessing radiomics for HPV prediction were included. Risk of bias (RoB) was evaluated using Prediction model Risk Of Bias ASsessment Tool (PROBAST), and data were synthesized based on imaging modality, architecture type/learning modalities, and the presence of external validation. Meta-analysis was performed for externally validated models using MetaBayesDTA and RStudio. <b>Results</b>: Twenty-four studies including 8627 patients were analyzed. Imaging modalities included computed tomography (CT), magnetic resonance imaging (MRI), contrast-enhanced computed tomography (CE-CT), and <sup>18</sup>F-fluorodeoxyglucose positron emission tomography (<sup>18</sup>F-FDG PET). Logistic regression, random forest, eXtreme Gradient Boosting (XGBoost), and convolutional neural networks (CNNs) were commonly used. Most datasets were imbalanced with a predominance of HPV+ cases. Only eight studies reported external validation results. AUROC values ranged between 0.59 and 0.87 in the internal validation and between 0.48 and 0.91 in the external validation results. RoB was high in most studies, mainly due to reliance on p16-only HPV testing, insufficient events, or inadequate handling of class imbalance. Deep Learning (DL) models achieved moderate performance with considerable heterogeneity (sensitivity: 0.61; specificity: 0.65). In contrast, traditional models provided higher, more consistent performance (sensitivity: 0.72; specificity: 0.77). <b>Conclusions</b>: Radiomic-based ML models show potential for HPV status prediction in OPSCC, but methodological heterogeneity and a high RoB limit current clinical applicability.

DiagnosticsVol. 16(1)
Poznan University of Medical Sciences (PL), Radboud University Nijmegen (NL), Emory University (US), Universidad de Oviedo (ES), Universidade de São Paulo (BR), Universidade Estadual de Campinas (UNICAMP) (BR), Hospital Israelita Albert Einstein (BR), University Medical Center (US), Radboud University Medical Center (NL), University Medical Center Utrecht (NL), AC Camargo Hospital (BR), Methodist University of Piracicaba (BR), Hospital Universitario Central de Asturias (ES), Jena University Hospital (DE), University of Zielona Góra (PL)
Fundação de Amparo à Pesquisa do Estado de São Paulo
Openalex Percentile: Top 13%
Radiomics and Machine Learning in Medical Imaging
1.36
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