Salts of Antifolate Pyrimethamine with Isomeric Aminobenzoic Acids: Exploring Packing Interactions and Pre-Crystallization Aggregation

Pyrimethamine (PYR), a drug approved for the treatment of infections caused by protozoan parasites, is a multifunctional API based on 2,4-diaminopyrimidine scaffold. The present study aims toward the development of novel solid forms of PYR, by combining it with three isomeric aminobenzoic acids-2-aminobenzoic acid (2NH<sub>2</sub>-BA), 3-aminobenzoic acid (3NH<sub>2</sub>-BA), and 4-aminobenzoic acid (4NH<sub>2</sub>-BA). Solution crystallization led to the formation of three new solvated salts of PYR (PYR/2NH<sub>2</sub>-BA/EtOH/H<sub>2</sub>O, PYR/3NH<sub>2</sub>-BA/EtOH, and PYR/4NH<sub>2</sub>-BA/EtOH/H<sub>2</sub>O). The detailed physicochemical properties of the formed compounds were characterized by single-crystal X-ray diffraction (SC-XRD), FTIR, PXRD, thermogravimetry (TG), and differential scanning calorimetry (DSC). Additionally, the pre-crystallization solutions of PYR with 2NH<sub>2</sub>-BA, 3NH<sub>2</sub>-BA, and 4NH<sub>2</sub>-BA were studied by electrospray ionization mass spectrometry technique (ESI-MS), which enabled the observation of peaks corresponding to noncovalently bonded molecules, providing insight into their specific aggregation in a solution/gas phase environment. We identified different non-covalent aggregates, including self-aggregates of aminobenzoic acids and PYR/aminobenzoic acid associates of different stoichiometries.

Authors

Institutions

Publication Details

Journal
International Journal of Molecular Sciences
Published
2025-12-23
DOI
https://doi.org/10.3390/ijms27010180
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Salts of Antifolate Pyrimethamine with Isomeric Aminobenzoic Acids: Exploring Packing Interactions and Pre-Crystallization Aggregation

Magdalena Zimnicka, Magdalena Ceborska, Karolina Cichocka, Arkadiusz Gajek et al.
International Journal of Molecular Sciences
Crystallography and molecular interactions
article

Salts of Antifolate Pyrimethamine with Isomeric Aminobenzoic Acids: Exploring Packing Interactions and Pre-Crystallization Aggregation

Magdalena Zimnicka, Magdalena Ceborska, Karolina Cichocka, Arkadiusz Gajek, Karolina Kędra
article en

Abstract

Pyrimethamine (PYR), a drug approved for the treatment of infections caused by protozoan parasites, is a multifunctional API based on 2,4-diaminopyrimidine scaffold. The present study aims toward the development of novel solid forms of PYR, by combining it with three isomeric aminobenzoic acids-2-aminobenzoic acid (2NH<sub>2</sub>-BA), 3-aminobenzoic acid (3NH<sub>2</sub>-BA), and 4-aminobenzoic acid (4NH<sub>2</sub>-BA). Solution crystallization led to the formation of three new solvated salts of PYR (PYR/2NH<sub>2</sub>-BA/EtOH/H<sub>2</sub>O, PYR/3NH<sub>2</sub>-BA/EtOH, and PYR/4NH<sub>2</sub>-BA/EtOH/H<sub>2</sub>O). The detailed physicochemical properties of the formed compounds were characterized by single-crystal X-ray diffraction (SC-XRD), FTIR, PXRD, thermogravimetry (TG), and differential scanning calorimetry (DSC). Additionally, the pre-crystallization solutions of PYR with 2NH<sub>2</sub>-BA, 3NH<sub>2</sub>-BA, and 4NH<sub>2</sub>-BA were studied by electrospray ionization mass spectrometry technique (ESI-MS), which enabled the observation of peaks corresponding to noncovalently bonded molecules, providing insight into their specific aggregation in a solution/gas phase environment. We identified different non-covalent aggregates, including self-aggregates of aminobenzoic acids and PYR/aminobenzoic acid associates of different stoichiometries.

International Journal of Molecular SciencesVol. 27(1)
Institute of Organic Chemistry (PL), Institute of Physical Chemistry (PL), Cardinal Stefan Wyszynski University in Warsaw (PL), Polish Academy of Sciences (PL)
Openalex Percentile: Top 26%
Crystallography and molecular interactions
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.