Self-assembling protein cages: from coiled-coil module to machine learning-driven <i>de novo</i> design of next-generation biomaterials

The rational design of self-assembling protein nanocages holds great promise for synthetic biology, biotechnology and biomedical applications. Protein nanocages are well-defined nanoparticles with an inner cavity formed by self-assembly of repetitive protein building blocks. These cavities can be tailored to encapsulate and protect cargo molecules such as drugs, enzymes, or imaging agents. The ability to design <i>de novo</i> protein cages has recently been revolutionized by new concepts of modular protein design, computational design of interacting surfaces and machine learning-based generative protein design. Protein cages can be designed in diverse architectures and sizes, and their assembly and disassembly can be regulated by chemical, biological, and physical signals. Here, we focus on the review of engineering strategies for the designed protein cages based on coiled coils or other modular protein domains, their functionalization and opportunities of customized engineered protein cages.

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Publication Details

Journal
Materials Advances
Published
2025-12-23
DOI
https://doi.org/10.1039/d5ma00792e
Primary Topic
Bacteriophages and microbial interactions
Type
article
Field-Weighted Citation Impact
0.00

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article

Self-assembling protein cages: from coiled-coil module to machine learning-driven de novo design of next-generation biomaterials

Helena Gradišar, Hana Esih, Roman Jerala, Arvind Kumar Gupta
Materials Advances
Bacteriophages and microbial interactions
article

Self-assembling protein cages: from coiled-coil module to machine learning-driven de novo design of next-generation biomaterials

Helena Gradišar, Hana Esih, Roman Jerala, Arvind Kumar Gupta
article en

Abstract

The rational design of self-assembling protein nanocages holds great promise for synthetic biology, biotechnology and biomedical applications. Protein nanocages are well-defined nanoparticles with an inner cavity formed by self-assembly of repetitive protein building blocks. These cavities can be tailored to encapsulate and protect cargo molecules such as drugs, enzymes, or imaging agents. The ability to design <i>de novo</i> protein cages has recently been revolutionized by new concepts of modular protein design, computational design of interacting surfaces and machine learning-based generative protein design. Protein cages can be designed in diverse architectures and sizes, and their assembly and disassembly can be regulated by chemical, biological, and physical signals. Here, we focus on the review of engineering strategies for the designed protein cages based on coiled coils or other modular protein domains, their functionalization and opportunities of customized engineered protein cages.

Materials AdvancesVol. 7(3)
National Institute of Biology (SI), EN-FIST Centre of Excellence (Slovenia) (SI), National Institute of Chemistry (SI)
HORIZON EUROPE European Innovation Council
Openalex Percentile: Top 30%
Bacteriophages and microbial interactions
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