Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect

We describe the discovery of a series of potent, selective, and orally bioavailable bis-acyl hydrazide inhibitors targeting the PRMT5·MTA complex for the treatment of MTAP-deleted cancers. Key to this discovery was the identification of major metabolite <b>M1</b>, resulting from <i>N</i>-demethylation of lead inhibitor compound <b>12</b>, as a potent hERG inhibitor. Leveraging the kinetic isotope effect, we generated methyl-<i>d</i><sub>3</sub> analog <b>16</b> which reduced the formation of <b>M1</b> in vivo, resulting in acceptable safety margins and an improved pharmacokinetic profile. Our data suggest this strategy could be employed more broadly to reduce undesirable metabolism of methylated amines.

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Journal
Journal of Medicinal Chemistry
Published
2025-12-22
DOI
https://doi.org/10.1021/acs.jmedchem.5c02392
Primary Topic
Cancer-related gene regulation
Type
article
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article

Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect

Radhakrishna Sura, Adam J. Schrier, Jessica Orf, Daniel E. Roa et al.
Journal of Medicinal Chemistry
Cancer-related gene regulation
article

Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect

Radhakrishna Sura, Adam J. Schrier, Jessica Orf, Daniel E. Roa, Doris Zane, Tatiana Zavorotinskaya, Laurent Debien, Pancham Lal Gupta, Ryan Ferrao, Hoa Thi Le, Rex Santos, Ashleigh N. Bristol, M. Gheiratmand, Bhavna Malik, Andrew J. Anderson, Michael L. Mitchell, Jung Hwa Kirschman, Gregory T. Notte, Zhengyu Yang, Congrong Niu, Phillip Benner, Elbert Chin, Pia Mukherjee, Sarah Hull, Joshua D. Farr, Ben June, Joey Chao-I Hung, Ariel N. Zahabian, Shaina V. Nguyen, Megan K. Armstrong, Chienhung Chou, Xiaoyong Fu, Yifan Deng, Katie A. Spence
article en

Abstract

We describe the discovery of a series of potent, selective, and orally bioavailable bis-acyl hydrazide inhibitors targeting the PRMT5·MTA complex for the treatment of MTAP-deleted cancers. Key to this discovery was the identification of major metabolite <b>M1</b>, resulting from <i>N</i>-demethylation of lead inhibitor compound <b>12</b>, as a potent hERG inhibitor. Leveraging the kinetic isotope effect, we generated methyl-<i>d</i><sub>3</sub> analog <b>16</b> which reduced the formation of <b>M1</b> in vivo, resulting in acceptable safety margins and an improved pharmacokinetic profile. Our data suggest this strategy could be employed more broadly to reduce undesirable metabolism of methylated amines.

Journal of Medicinal ChemistryVol. 69(1)
UC Irvine Health (US), Gilead Sciences (United States) (US)
Good health and well-being
Openalex Percentile: Top 37%
Cancer-related gene regulation
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