Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect
We describe the discovery of a series of potent, selective, and orally bioavailable bis-acyl hydrazide inhibitors targeting the PRMT5·MTA complex for the treatment of MTAP-deleted cancers. Key to this discovery was the identification of major metabolite <b>M1</b>, resulting from <i>N</i>-demethylation of lead inhibitor compound <b>12</b>, as a potent hERG inhibitor. Leveraging the kinetic isotope effect, we generated methyl-<i>d</i><sub>3</sub> analog <b>16</b> which reduced the formation of <b>M1</b> in vivo, resulting in acceptable safety margins and an improved pharmacokinetic profile. Our data suggest this strategy could be employed more broadly to reduce undesirable metabolism of methylated amines.
Authors
- Radhakrishna Sura (ORCID: https://orcid.org/0000-0001-6337-5588)
- Adam J. Schrier
- Jessica Orf
- Daniel E. Roa (ORCID: https://orcid.org/0000-0003-4630-2525)
- Doris Zane (ORCID: https://orcid.org/0000-0002-8696-3275)
- Tatiana Zavorotinskaya
- Laurent Debien
- Pancham Lal Gupta (ORCID: https://orcid.org/0000-0003-3529-5120)
- Ryan Ferrao (ORCID: https://orcid.org/0000-0002-6697-0611)
- Hoa Thi Le (ORCID: https://orcid.org/0000-0001-9050-2706)
- Rex Santos
- Ashleigh N. Bristol
- M. Gheiratmand (ORCID: https://orcid.org/0000-0002-5301-1710)
- Bhavna Malik
- Andrew J. Anderson (ORCID: https://orcid.org/0000-0001-7015-0061)
- Michael L. Mitchell
- Jung Hwa Kirschman
- Gregory T. Notte
- Zhengyu Yang (ORCID: https://orcid.org/0000-0002-7865-240X)
- Congrong Niu (ORCID: https://orcid.org/0000-0003-0225-5616)
- Phillip Benner
- Elbert Chin
- Pia Mukherjee
- Sarah Hull
- Joshua D. Farr
- Ben June
- Joey Chao-I Hung
- Ariel N. Zahabian
- Shaina V. Nguyen
- Megan K. Armstrong
- Chienhung Chou
- Xiaoyong Fu
- Yifan Deng
- Katie A. Spence
Institutions
- UC Irvine Health (US)
- Gilead Sciences (United States) (US)
Publication Details
- Journal
- Journal of Medicinal Chemistry
- Published
- 2025-12-22
- DOI
- https://doi.org/10.1021/acs.jmedchem.5c02392
- Primary Topic
- Cancer-related gene regulation
- Type
- article
- Field-Weighted Citation Impact
- 0.00