Hypergraph Foundation Model

Hypergraph neural networks (HGNNs) effectively model complex high-order relationships in domains like protein interactions and social networks by connecting multiple vertices through hyperedges, enhancing modeling capabilities, and reducing information loss. Developing foundation models for hypergraphs is challenging due to their distinct data, which includes both vertex features and intricate structural information. We present Hyper-FM, a Hypergraph Foundation Model for multi-domain knowledge extraction, featuring Hierarchical High-Order Neighbor Guided Vertex Knowledge Embedding for vertex feature representation and Hierarchical Multi-Hypergraph Guided Structural Knowledge Extraction for structural information. Additionally, we curate 11 text-attributed hypergraph datasets to advance research between HGNNs and LLMs. Experiments on these datasets show that Hyper-FM outperforms baseline methods by approximately 13.4%, validating our approach. Furthermore, we propose the first scaling law for hypergraph foundation models, demonstrating that increasing domain diversity significantly enhances performance, unlike merely augmenting vertex and hyperedge counts. This underscores the critical role of domain diversity in scaling hypergraph models.

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Publication Details

Journal
IEEE Transactions on Pattern Analysis and Machine Intelligence
Published
2025-12-23
DOI
https://doi.org/10.1109/tpami.2025.3647504
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
0.00
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article

Hypergraph Foundation Model

Han Hu, Xiangmin Han, Yifan Feng, Shiquan Liu et al.
IEEE Transactions on Pattern Analysis and Machine Intelligence
Advanced Graph Neural Networks
article

Hypergraph Foundation Model

Han Hu, Xiangmin Han, Yifan Feng, Shiquan Liu, ShaoYi DU, Zongze Wu, Yue Gao
article en

Abstract

Hypergraph neural networks (HGNNs) effectively model complex high-order relationships in domains like protein interactions and social networks by connecting multiple vertices through hyperedges, enhancing modeling capabilities, and reducing information loss. Developing foundation models for hypergraphs is challenging due to their distinct data, which includes both vertex features and intricate structural information. We present Hyper-FM, a Hypergraph Foundation Model for multi-domain knowledge extraction, featuring Hierarchical High-Order Neighbor Guided Vertex Knowledge Embedding for vertex feature representation and Hierarchical Multi-Hypergraph Guided Structural Knowledge Extraction for structural information. Additionally, we curate 11 text-attributed hypergraph datasets to advance research between HGNNs and LLMs. Experiments on these datasets show that Hyper-FM outperforms baseline methods by approximately 13.4%, validating our approach. Furthermore, we propose the first scaling law for hypergraph foundation models, demonstrating that increasing domain diversity significantly enhances performance, unlike merely augmenting vertex and hyperedge counts. This underscores the critical role of domain diversity in scaling hypergraph models.

IEEE Transactions on Pattern Analysis and Machine IntelligenceVol. 48(4)
Beijing Institute of Technology (CN), Shenzhen University (CN), Xi'an Jiaotong University (CN), Tsinghua University (CN)
Openalex Percentile: Top 19%
Advanced Graph Neural Networks
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