Selection and evaluation of reference genes for quantitative real-time polymerase chain reaction normalization in <i>Pieris melete</i> (Lepidoptera, Pieridae)

Accurate normalization of gene expression data in real-time quantitative polymerase chain reaction (RT-qPCR) relies on the identification of stably expressed reference genes, which remains uncharacterized in Pieris melete Ménétriés, a cruciferous crop pest with agricultural significance. This study systematically evaluated eight candidate reference genes (GAPDH, α-tub, β-actin, 18S, β-tub, EF1α, RPL27, RPS15) across four experimental conditions: developmental stages, tissues, temperature stresses, and diapause stages. Stability rankings were determined using four algorithms (geNorm, NormFinder, BestKeeper, ΔCt method) integrated via RefFinder. Results revealed that at different condition-specific stability patterns, RPL27 and EF1α were optimal for developmental stages, RPL27 paired with 18S were suitable for tissue analyses; EF1α and α-tub were stable at different temperature stresses, and RPL27 combined with RPS15 were stably expressed during diapause. Pairwise variation analysis confirmed that dual reference genes sufficiently enhanced normalization accuracy. This work provides the validated reference genes panel for P. melete, addressing a critical gap in molecular studies of this pest and ensuring robust gene expression analyses for future research on diapause regulation and pest control strategies.

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Publication Details

Journal
Journal of Insect Science
Published
2025-11-07
DOI
https://doi.org/10.1093/jisesa/ieaf108
Primary Topic
Molecular Biology Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Selection and evaluation of reference genes for quantitative real-time polymerase chain reaction normalization in Pieris melete (Lepidoptera, Pieridae)

Wanna Zhang, Yan Peng, Xing Liu, Ting Jiang et al.
Journal of Insect Science
Molecular Biology Techniques and Applications
article

Selection and evaluation of reference genes for quantitative real-time polymerase chain reaction normalization in Pieris melete (Lepidoptera, Pieridae)

Wanna Zhang, Yan Peng, Xing Liu, Ting Jiang, Haijun Xiao, Ning Zou
article en

Abstract

Accurate normalization of gene expression data in real-time quantitative polymerase chain reaction (RT-qPCR) relies on the identification of stably expressed reference genes, which remains uncharacterized in Pieris melete Ménétriés, a cruciferous crop pest with agricultural significance. This study systematically evaluated eight candidate reference genes (GAPDH, α-tub, β-actin, 18S, β-tub, EF1α, RPL27, RPS15) across four experimental conditions: developmental stages, tissues, temperature stresses, and diapause stages. Stability rankings were determined using four algorithms (geNorm, NormFinder, BestKeeper, ΔCt method) integrated via RefFinder. Results revealed that at different condition-specific stability patterns, RPL27 and EF1α were optimal for developmental stages, RPL27 paired with 18S were suitable for tissue analyses; EF1α and α-tub were stable at different temperature stresses, and RPL27 combined with RPS15 were stably expressed during diapause. Pairwise variation analysis confirmed that dual reference genes sufficiently enhanced normalization accuracy. This work provides the validated reference genes panel for P. melete, addressing a critical gap in molecular studies of this pest and ensuring robust gene expression analyses for future research on diapause regulation and pest control strategies.

Journal of Insect ScienceVol. 25(6)
Beijing Forestry University (CN), Academy of National Food and Strategic Reserves Administration (CN), Jiangxi Academy of Agricultural Sciences (CN), Jiangxi Agricultural University (CN)
National Natural Science Foundation of China
Zero hunger
Openalex Percentile: Top 37%
Molecular Biology Techniques and Applications
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