Multilabel feature selection using graph neural networks and differential evolution optimization

In recent years, the exponential growth of high-dimensional data across domains such as data mining, machine learning, bioinformatics, social network analysis, and image processing has amplified the importance of feature selection as a primary method for dimensionality reduction. High-dimensional datasets often include redundant, noisy, and irrelevant features that hinder the development of accurate, efficient, and reliable learning models. This issue becomes even more critical in multi-label scenarios, where each instance may be associated with multiple labels, creating intricate interactions between features and labels as well as interdependencies among the labels themselves. Traditional feature selection techniques, designed primarily for single-label problems, struggle to address the complexities of multi-label data. Consequently, there is a pressing need for novel approaches that can effectively capture and utilize these complexities. This study introduces a hybrid method that combines the representational power of Graph Neural Networks (GNNs) with the optimization efficiency of Differential Evolution (DE) to tackle multi-label feature selection challenges. GNNs leverage graph structures to model complex relationships between features and labels, allowing for simultaneous consideration of feature relevance and label dependencies. DE, a robust global optimization algorithm, ensures the selection of an optimal subset of features by exploring vast search spaces and avoiding local optima. The proposed method was evaluated on six diverse datasets spanning text and image domains. GNN-DE achieves optimal classification performance while selecting fewer features, demonstrating its efficiency in reducing computational complexity. For datasets with complex label correlations, such as Enron and Scene, this method outperforms existing approaches.

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Publication Details

Journal
Scientific Reports
Published
2025-12-23
DOI
https://doi.org/10.1038/s41598-025-27824-x
Citations
1
Primary Topic
Text and Document Classification Technologies
Type
article
Field-Weighted Citation Impact
2.48
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article

Multilabel feature selection using graph neural networks and differential evolution optimization

Ning Pan
1 citations
Scientific Reports
Text and Document Classification Technologies
2.48
article

Multilabel feature selection using graph neural networks and differential evolution optimization

Ning Pan
article en
1 citations

Abstract

In recent years, the exponential growth of high-dimensional data across domains such as data mining, machine learning, bioinformatics, social network analysis, and image processing has amplified the importance of feature selection as a primary method for dimensionality reduction. High-dimensional datasets often include redundant, noisy, and irrelevant features that hinder the development of accurate, efficient, and reliable learning models. This issue becomes even more critical in multi-label scenarios, where each instance may be associated with multiple labels, creating intricate interactions between features and labels as well as interdependencies among the labels themselves. Traditional feature selection techniques, designed primarily for single-label problems, struggle to address the complexities of multi-label data. Consequently, there is a pressing need for novel approaches that can effectively capture and utilize these complexities. This study introduces a hybrid method that combines the representational power of Graph Neural Networks (GNNs) with the optimization efficiency of Differential Evolution (DE) to tackle multi-label feature selection challenges. GNNs leverage graph structures to model complex relationships between features and labels, allowing for simultaneous consideration of feature relevance and label dependencies. DE, a robust global optimization algorithm, ensures the selection of an optimal subset of features by exploring vast search spaces and avoiding local optima. The proposed method was evaluated on six diverse datasets spanning text and image domains. GNN-DE achieves optimal classification performance while selecting fewer features, demonstrating its efficiency in reducing computational complexity. For datasets with complex label correlations, such as Enron and Scene, this method outperforms existing approaches.

Scientific ReportsVol. 15(1)
Hubei University (CN)
Openalex Percentile: Top 6%
Text and Document Classification Technologies
2.48
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