Fine-Tuning LLaMA2 for Summarizing Discharge Notes: Evaluating the Role of Highlighted Information

This study investigates whether incorporating highlighted information in discharge notes improves the quality of the summaries generated by Large Language Models (LLMs). Specifically, it evaluates the effect of using highlighted versus unhighlighted inputs for fine-tuning LLaMA2-13B model for summarization tasks. We fine-tuned LlaMA2-13B in two variants using MIMIC-IV-Ext-BHC dataset: one variant fine-tuned with the highlighted discharge notes (H-LLaMA), and the other on the same set of notes without highlighting (U-LLaMA). Highlighting was performed automatically using a Cardiology Interface Terminology (CIT) presented in our previous work. H-LLaMA and U-LLaMA were evaluated on a randomly selected test set of 100 discharge notes using multiple metrics (including BERTScore, ROUGE-L, BLEU, and SummaC_CONV). Additionally, LLM-based judgment via ChatGPT-4o rated coherence, fluency, conciseness, and correctness, alongside a manual completeness evaluation on a random sample of 40 notes. H-LLaMA consistently outperformed U-LLaMA across all metrics. H-summaries, generated using H-LLaMA, in comparison to U-summaries, generated using U-LLaMA, achieved higher BERTScore (63.75 vs. 59.61), ROUGE-L (23.43 vs. 21.82), BLEU (10.4 vs. 8.41), and SummaC_CONV (67.7 vs. 40.2). Manual review also showed improved completeness for H-summaries (54.8% vs. 47.6%). All improvements were statistically significant (p < 0.05). Moreover, LLM-based evaluation indicated higher average ratings across coherence, correctness, and conciseness.

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Publication Details

Journal
Big Data and Cognitive Computing
Published
2025-12-22
DOI
https://doi.org/10.3390/bdcc10010004
Citations
2
Primary Topic
Machine Learning in Healthcare
Type
article
Field-Weighted Citation Impact
4.96
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article

Fine-Tuning LLaMA2 for Summarizing Discharge Notes: Evaluating the Role of Highlighted Information

Fadi P. Deek, Yehoshua Perl, Mahshad Koohi H. Dehkordi, Hao Liu
2 citations
Big Data and Cognitive Computing
Machine Learning in Healthcare
4.96
article

Fine-Tuning LLaMA2 for Summarizing Discharge Notes: Evaluating the Role of Highlighted Information

Fadi P. Deek, Yehoshua Perl, Mahshad Koohi H. Dehkordi, Hao Liu
article en
2 citations

Abstract

This study investigates whether incorporating highlighted information in discharge notes improves the quality of the summaries generated by Large Language Models (LLMs). Specifically, it evaluates the effect of using highlighted versus unhighlighted inputs for fine-tuning LLaMA2-13B model for summarization tasks. We fine-tuned LlaMA2-13B in two variants using MIMIC-IV-Ext-BHC dataset: one variant fine-tuned with the highlighted discharge notes (H-LLaMA), and the other on the same set of notes without highlighting (U-LLaMA). Highlighting was performed automatically using a Cardiology Interface Terminology (CIT) presented in our previous work. H-LLaMA and U-LLaMA were evaluated on a randomly selected test set of 100 discharge notes using multiple metrics (including BERTScore, ROUGE-L, BLEU, and SummaC_CONV). Additionally, LLM-based judgment via ChatGPT-4o rated coherence, fluency, conciseness, and correctness, alongside a manual completeness evaluation on a random sample of 40 notes. H-LLaMA consistently outperformed U-LLaMA across all metrics. H-summaries, generated using H-LLaMA, in comparison to U-summaries, generated using U-LLaMA, achieved higher BERTScore (63.75 vs. 59.61), ROUGE-L (23.43 vs. 21.82), BLEU (10.4 vs. 8.41), and SummaC_CONV (67.7 vs. 40.2). Manual review also showed improved completeness for H-summaries (54.8% vs. 47.6%). All improvements were statistically significant (p < 0.05). Moreover, LLM-based evaluation indicated higher average ratings across coherence, correctness, and conciseness.

Big Data and Cognitive ComputingVol. 10(1)
New Jersey Institute of Technology (US), Montclair State University (US)
Quality Education
Openalex Percentile: Top 4%
Machine Learning in Healthcare
4.96
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