Evaluation of Antiproliferative Activity and Molecular Modeling Studies of Some Novel Benzimidazolone-Bridged Hybrid Compounds

<b>Background/Objectives</b>: Cancer is among the leading causes of mortality worldwide. In 2022 alone, the global cancer death toll stood at 9.74 million. Projections indicate that this figure will rise to 10.4 million by 2025. <b>Methods</b>: A new series of benzimidazolone-bridged hybrid compounds containing thiophene, furan, oxadiazole, piperazine, and coumarin moieties was synthesized and structurally characterized by <sup>1</sup>H-NMR, <sup>13</sup>C-NMR (APT), and elemental analysis. Their cytotoxic effects were evaluated by MTT assay against human lung (A549), human breast (MCF-7), and human cervical (HeLa) cancer cell lines, and the non-cancerous HEK293 cell line after 48 h exposure over a concentration range of 0.5-250 µM. IC<sub>50</sub> values were determined, and Selectivity Indexes (SI) were calculated using HEK293 as the reference normal cell line. Molecular docking studies were carried out using the Glide XP protocol against VEGFR2 (PDB ID: 4ASD) and CDK4-Cyclin D3 (PDB ID: 7SJ3), with sorafenib and abemaciclib as reference inhibitors. <b>Results</b>: The results of anticancer activity were compared with doxorubicin (IC<sub>50</sub> ± SD (µM)/SI: 4.3 ± 0.2/1.20 for A549, 6.4 ± 0.37/0.77 for MCF-7, 3.4 ± 0.19/1.54 for HeLa), a drug used for cancer chemotherapy. The structures of the newly synthesized hybrid compounds were identified by <sup>1</sup>H-NMR, <sup>13</sup>C-NMR (APT), and elemental analysis data. These hybrid compounds represent a promising class of anticancer agents. Several compounds demonstrated marked and concentration-dependent cytotoxicity across all cancer cell lines, with HeLa cells showing the highest overall sensitivity. The introduction of an oxadiazole ring (compound <b>7</b>) and coumarin substituents (compounds <b>12b</b>-<b>12d</b>) markedly improved anticancer activity and selectivity, yielding low-micromolar IC<sub>50</sub> values in HeLa cells (10.6-13.6 µM) and high Selectivity Indexes (SI = 2.0-3.63). Compound <b>6</b> also exhibited balanced potency across A549, MCF-7, and HeLa cells (IC<sub>50</sub> = 28.3-31.2 µM) with SI values ≥ 2.0. Compound <b>9</b> showed strong cytotoxicity across all cancer cell lines; its moderate SI values indicate lower discrimination between malignant and non-malignant cells. Taken together, these findings identified compounds <b>7</b>, <b>12b</b>-<b>12d</b>, <b>6</b>, and <b>12c</b> as the most promising benzimidazolone-based candidates, displaying both potent cytotoxicity and favorable selectivity over non-malignant HEK293 cells. <b>Conclusions</b>: Among the synthesized molecules, the oxadiazole derivative (<b>7</b>) and the coumarin-based hybrids (<b>12b</b>-<b>12d</b>) exhibited the strongest combination of cytotoxic activity and selectivity, reflected by their low IC<sub>50</sub> values and high SI ratios. Notably, compound <b>12c</b> combined strong biological activity with the <i>highest predicted VEGFR2 affinity</i> in the series, highlighting it as a particularly promising scaffold. While compound <b>9</b> exhibited excellent docking scores toward both VEGFR2 and CDK4, its lower selectivity suggests a need for further structural refinement. Overall, the biological and computational findings converge to identify these benzimidazolone hybrids as credible lead candidates for future anticancer optimization.

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Publication Details

Journal
Pharmaceuticals
Published
2025-12-17
DOI
https://doi.org/10.3390/ph18121899
Citations
1
Primary Topic
Advanced Breast Cancer Therapies
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article
Field-Weighted Citation Impact
1.52
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article

Evaluation of Antiproliferative Activity and Molecular Modeling Studies of Some Novel Benzimidazolone-Bridged Hybrid Compounds

1 citations
Pharmaceuticals
Advanced Breast Cancer Therapies
1.52
article

Evaluation of Antiproliferative Activity and Molecular Modeling Studies of Some Novel Benzimidazolone-Bridged Hybrid Compounds

article en
1 citations

Abstract

<b>Background/Objectives</b>: Cancer is among the leading causes of mortality worldwide. In 2022 alone, the global cancer death toll stood at 9.74 million. Projections indicate that this figure will rise to 10.4 million by 2025. <b>Methods</b>: A new series of benzimidazolone-bridged hybrid compounds containing thiophene, furan, oxadiazole, piperazine, and coumarin moieties was synthesized and structurally characterized by <sup>1</sup>H-NMR, <sup>13</sup>C-NMR (APT), and elemental analysis. Their cytotoxic effects were evaluated by MTT assay against human lung (A549), human breast (MCF-7), and human cervical (HeLa) cancer cell lines, and the non-cancerous HEK293 cell line after 48 h exposure over a concentration range of 0.5-250 µM. IC<sub>50</sub> values were determined, and Selectivity Indexes (SI) were calculated using HEK293 as the reference normal cell line. Molecular docking studies were carried out using the Glide XP protocol against VEGFR2 (PDB ID: 4ASD) and CDK4-Cyclin D3 (PDB ID: 7SJ3), with sorafenib and abemaciclib as reference inhibitors. <b>Results</b>: The results of anticancer activity were compared with doxorubicin (IC<sub>50</sub> ± SD (µM)/SI: 4.3 ± 0.2/1.20 for A549, 6.4 ± 0.37/0.77 for MCF-7, 3.4 ± 0.19/1.54 for HeLa), a drug used for cancer chemotherapy. The structures of the newly synthesized hybrid compounds were identified by <sup>1</sup>H-NMR, <sup>13</sup>C-NMR (APT), and elemental analysis data. These hybrid compounds represent a promising class of anticancer agents. Several compounds demonstrated marked and concentration-dependent cytotoxicity across all cancer cell lines, with HeLa cells showing the highest overall sensitivity. The introduction of an oxadiazole ring (compound <b>7</b>) and coumarin substituents (compounds <b>12b</b>-<b>12d</b>) markedly improved anticancer activity and selectivity, yielding low-micromolar IC<sub>50</sub> values in HeLa cells (10.6-13.6 µM) and high Selectivity Indexes (SI = 2.0-3.63). Compound <b>6</b> also exhibited balanced potency across A549, MCF-7, and HeLa cells (IC<sub>50</sub> = 28.3-31.2 µM) with SI values ≥ 2.0. Compound <b>9</b> showed strong cytotoxicity across all cancer cell lines; its moderate SI values indicate lower discrimination between malignant and non-malignant cells. Taken together, these findings identified compounds <b>7</b>, <b>12b</b>-<b>12d</b>, <b>6</b>, and <b>12c</b> as the most promising benzimidazolone-based candidates, displaying both potent cytotoxicity and favorable selectivity over non-malignant HEK293 cells. <b>Conclusions</b>: Among the synthesized molecules, the oxadiazole derivative (<b>7</b>) and the coumarin-based hybrids (<b>12b</b>-<b>12d</b>) exhibited the strongest combination of cytotoxic activity and selectivity, reflected by their low IC<sub>50</sub> values and high SI ratios. Notably, compound <b>12c</b> combined strong biological activity with the <i>highest predicted VEGFR2 affinity</i> in the series, highlighting it as a particularly promising scaffold. While compound <b>9</b> exhibited excellent docking scores toward both VEGFR2 and CDK4, its lower selectivity suggests a need for further structural refinement. Overall, the biological and computational findings converge to identify these benzimidazolone hybrids as credible lead candidates for future anticancer optimization.

PharmaceuticalsVol. 18(12)
Recep Tayyip Erdoğan University (TR), Sinop University (TR)
Good health and well-being
Openalex Percentile: Top 12%
Advanced Breast Cancer Therapies
1.52
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