S1305 Multimodal Deep Learning for Automated Gastrointestinal Diagnosis Using the HyperKvasir Dataset

Introduction: Accurate, real-time classification of gastrointestinal (GI) findings during endoscopy remains a clinical challenge due to variability in lesion appearance, motion artifacts, and class imbalance. Artificial intelligence offers promising support, but most existing models rely on single-modality inputs. We aimed to develop a multimodal AI framework that integrates spatial, structural, and temporal data to improve diagnostic performance using the HyperKvasir dataset. Methods: We developed a multimodal deep learning pipeline to classify 23 gastrointestinal findings using the HyperKvasir dataset, which includes 10,662 labeled images, 1,000 segmentation masks, and 373 annotated videos (>1 million frames). Vision Transformers were used to extract 768-dimensional features from each modality. Video frames were sampled at 1 frame per second, and segmentation masks were aligned with labeled images. Features from all available modalities were concatenated per sample without enforcing label intersection, preserving data diversity. A Multilayer Perceptron classifier was trained on these fused embeddings and evaluated using standard metrics. Results: The model achieved 91.86% accuracy and an F1-score of 0.92. Area under the curve values exceeded 0.99 for most classes. The confusion matrix demonstrated strong performance across common and rare findings, while t-SNE visualization confirmed clear inter-class separability. The framework effectively integrates spatial, structural, and temporal features, supporting accurate, scalable classification in diverse clinical settings. Conclusion: This multimodal artificial intelligence framework demonstrates high diagnostic accuracy by leveraging diverse data types in endoscopic imaging. Its scalable, label-efficient design supports real-world application in clinical decision support, with potential for integration into endoscopy suites for real-time classification and quality assurance.

Publication Details

Journal
The American Journal of Gastroenterology
Published
2025-10-01
DOI
https://doi.org/10.14309/01.ajg.0001132680.19886.3f
Primary Topic
Colorectal Cancer Screening and Detection
Type
article
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article

S1305 Multimodal Deep Learning for Automated Gastrointestinal Diagnosis Using the HyperKvasir Dataset

The American Journal of Gastroenterology
Colorectal Cancer Screening and Detection
article

S1305 Multimodal Deep Learning for Automated Gastrointestinal Diagnosis Using the HyperKvasir Dataset

article en

Abstract

Introduction: Accurate, real-time classification of gastrointestinal (GI) findings during endoscopy remains a clinical challenge due to variability in lesion appearance, motion artifacts, and class imbalance. Artificial intelligence offers promising support, but most existing models rely on single-modality inputs. We aimed to develop a multimodal AI framework that integrates spatial, structural, and temporal data to improve diagnostic performance using the HyperKvasir dataset. Methods: We developed a multimodal deep learning pipeline to classify 23 gastrointestinal findings using the HyperKvasir dataset, which includes 10,662 labeled images, 1,000 segmentation masks, and 373 annotated videos (>1 million frames). Vision Transformers were used to extract 768-dimensional features from each modality. Video frames were sampled at 1 frame per second, and segmentation masks were aligned with labeled images. Features from all available modalities were concatenated per sample without enforcing label intersection, preserving data diversity. A Multilayer Perceptron classifier was trained on these fused embeddings and evaluated using standard metrics. Results: The model achieved 91.86% accuracy and an F1-score of 0.92. Area under the curve values exceeded 0.99 for most classes. The confusion matrix demonstrated strong performance across common and rare findings, while t-SNE visualization confirmed clear inter-class separability. The framework effectively integrates spatial, structural, and temporal features, supporting accurate, scalable classification in diverse clinical settings. Conclusion: This multimodal artificial intelligence framework demonstrates high diagnostic accuracy by leveraging diverse data types in endoscopic imaging. Its scalable, label-efficient design supports real-world application in clinical decision support, with potential for integration into endoscopy suites for real-time classification and quality assurance.

The American Journal of GastroenterologyVol. 120(10S2)
Openalex Percentile: Top 34%
Colorectal Cancer Screening and Detection
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S1305 Multimodal Deep Learning for Automated Gastrointestinal Diagnosis Using the HyperKvasir Dataset · The American Journal of Gastroenterology (2025) | TGRS Research Map | TGRS