Information-theoretic quantification of high-order feature effects in classification problems

Understanding the contribution of individual features in predictive models remains a central goal in interpretable machine learning, and while many model-agnostic methods exist to estimate feature importance, they often fall short in capturing high-order interactions and disentangling overlapping contributions. In this work, we present an information-theoretic extension of the High-order interactions for Feature importance (Hi-Fi) method, leveraging Conditional Mutual Information (CMI) estimated via a k-Nearest Neighbor (kNN) approach working on mixed discrete and continuous random variables. Our framework decomposes feature contributions into unique, synergistic, and redundant components, offering a richer, model-free understanding of their predictive roles. We validate the method using synthetic datasets with known Gaussian structures, where ground truth interaction patterns are numerically derived, and further test it on non-Gaussian and real-world gene expression data from TCGA-BRCA. Results indicate that the proposed estimator accurately recovers theoretical and expected findings, providing a potential use case for developing feature selection algorithms or model development based on the interaction analysis.

Publication Details

Journal
Chaos Solitons & Fractals
Published
2025-12-07
DOI
https://doi.org/10.1016/j.chaos.2025.117724
Primary Topic
Advanced Computational Techniques in Science and Engineering
Type
article
Field-Weighted Citation Impact
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article

Information-theoretic quantification of high-order feature effects in classification problems

Chaos Solitons & Fractals
Advanced Computational Techniques in Science and Engineering
article

Information-theoretic quantification of high-order feature effects in classification problems

article en

Abstract

Understanding the contribution of individual features in predictive models remains a central goal in interpretable machine learning, and while many model-agnostic methods exist to estimate feature importance, they often fall short in capturing high-order interactions and disentangling overlapping contributions. In this work, we present an information-theoretic extension of the High-order interactions for Feature importance (Hi-Fi) method, leveraging Conditional Mutual Information (CMI) estimated via a k-Nearest Neighbor (kNN) approach working on mixed discrete and continuous random variables. Our framework decomposes feature contributions into unique, synergistic, and redundant components, offering a richer, model-free understanding of their predictive roles. We validate the method using synthetic datasets with known Gaussian structures, where ground truth interaction patterns are numerically derived, and further test it on non-Gaussian and real-world gene expression data from TCGA-BRCA. Results indicate that the proposed estimator accurately recovers theoretical and expected findings, providing a potential use case for developing feature selection algorithms or model development based on the interaction analysis.

Chaos Solitons & FractalsVol. 204
Climate action
Openalex Percentile: Top 29%
Advanced Computational Techniques in Science and Engineering
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Information-theoretic quantification of high-order feature effects in classification problems · Chaos Solitons & Fractals (2025) | TGRS Research Map | TGRS