Reaction-diffusion in a 2D array of cell mimics, perfused by a microfluidic biochemostat

In biological systems, the spatio-temporal localization, of biochemical reactions, is the constituent force generating compartmentalized living entities. This work is part of the collective effort, of bottom-up synthetic biology, to create synthetic cells and communities from first principles. In this work, I used porous polymer cell mimics to compartmentalize discrete DNA packages. I employed these properties to execute gene regulatory networks, programmed within the cell mimics, using cell free transcription and translation (TXTL). I developed a multilayer microfluidic chip to perfuse a 2D array of cell mimics immobilizing a reaction diffusion gene regulatory network.

Publication Details

Journal
data_UMR
Published
2025-11-06
DOI
https://doi.org/10.17192/z2025.0662
Primary Topic
DNA and Biological Computing
Type
article
Field-Weighted Citation Impact
0.00
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article

Reaction-diffusion in a 2D array of cell mimics, perfused by a microfluidic biochemostat

data_UMR
DNA and Biological Computing
article

Reaction-diffusion in a 2D array of cell mimics, perfused by a microfluidic biochemostat

article en

Abstract

In biological systems, the spatio-temporal localization, of biochemical reactions, is the constituent force generating compartmentalized living entities. This work is part of the collective effort, of bottom-up synthetic biology, to create synthetic cells and communities from first principles. In this work, I used porous polymer cell mimics to compartmentalize discrete DNA packages. I employed these properties to execute gene regulatory networks, programmed within the cell mimics, using cell free transcription and translation (TXTL). I developed a multilayer microfluidic chip to perfuse a 2D array of cell mimics immobilizing a reaction diffusion gene regulatory network.

data_UMR
Openalex Percentile: Top 43%
DNA and Biological Computing
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Reaction-diffusion in a 2D array of cell mimics, perfused by a microfluidic biochemostat · data_UMR (2025) | TGRS Research Map | TGRS