Enhancing Exposure Assessment: A Hybrid Within-Person Biospecimen Pooling Approach to Reduce Biomarker Variability and Cost

ABSTRACT Objective: Biomarkers are crucial for exposure assessment in environmental research, but single biospecimen measurements can be unreliable due to high intra-individual variability (IIV). Repeated within-person sampling improves reliability but is costly and impractical. The hybrid pooled-unpooled design, which pools biospecimens from individuals with varying pooled sizes, offers a cost-effective alternative but fails when pooling error (PE) exceeds IIV. We developed a regression calibration method to correct exposure effect estimates (βs) if post-experiment variance components reveal excessive PE. Material and Methods: This study, motivated on phenol measurements in the EAGeR trial where PE > IIV. A calibration factor was developed to correct for both IIV and PE, ensuring accurate β estimation and its 95% confidence intervals (CI). A simulation (1000 runs, n=1000, 10 repeated samples) was conducted with varying pooling sizes and three error scenarios (PE>IIV, PE<IIV, PE=IIV), assuming the normally distributed errors are independent with constant variance. We assessed the design’s robustness by comparing bias and other metrics for uncalibrated versus calibrated β estimates in a binary outcome model, with 95% CI coverage. Results: Uncalibrated estimates of β, were consistently underestimated across all scenarios, with percent bias ranging from 51.3-66.8%. Bias was most severe when PE > IIV or when both were similar (PE ≈ IIV). After applying calibration, bias improved substantially, reducing to a range of 7.8%-20.7%, with the highest residual bias observed when PE ≈ IIV. CI coverage was within acceptable limits, close to 95%. Conclusion: Hybrid within-person biospecimen pooling with regression calibration is a cost-effective method for estimating β when biomarkers are variable and costly. Its accuracy depends on the relationship between PE and IIV—unknown before pooling. If PE is excessive, bias can occur, but our method provides a post-experiment correction, making it ideal for studies with high biomarker variability, like environmental phenols.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-08-18
DOI
https://doi.org/10.5281/zenodo.17488032
Primary Topic
Health, Environment, Cognitive Aging
Type
article
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article

Enhancing Exposure Assessment: A Hybrid Within-Person Biospecimen Pooling Approach to Reduce Biomarker Variability and Cost

Zenodo (CERN European Organization for Nuclear Research)
Health, Environment, Cognitive Aging
article

Enhancing Exposure Assessment: A Hybrid Within-Person Biospecimen Pooling Approach to Reduce Biomarker Variability and Cost

article en

Abstract

ABSTRACT Objective: Biomarkers are crucial for exposure assessment in environmental research, but single biospecimen measurements can be unreliable due to high intra-individual variability (IIV). Repeated within-person sampling improves reliability but is costly and impractical. The hybrid pooled-unpooled design, which pools biospecimens from individuals with varying pooled sizes, offers a cost-effective alternative but fails when pooling error (PE) exceeds IIV. We developed a regression calibration method to correct exposure effect estimates (βs) if post-experiment variance components reveal excessive PE. Material and Methods: This study, motivated on phenol measurements in the EAGeR trial where PE > IIV. A calibration factor was developed to correct for both IIV and PE, ensuring accurate β estimation and its 95% confidence intervals (CI). A simulation (1000 runs, n=1000, 10 repeated samples) was conducted with varying pooling sizes and three error scenarios (PE>IIV, PE<IIV, PE=IIV), assuming the normally distributed errors are independent with constant variance. We assessed the design’s robustness by comparing bias and other metrics for uncalibrated versus calibrated β estimates in a binary outcome model, with 95% CI coverage. Results: Uncalibrated estimates of β, were consistently underestimated across all scenarios, with percent bias ranging from 51.3-66.8%. Bias was most severe when PE > IIV or when both were similar (PE ≈ IIV). After applying calibration, bias improved substantially, reducing to a range of 7.8%-20.7%, with the highest residual bias observed when PE ≈ IIV. CI coverage was within acceptable limits, close to 95%. Conclusion: Hybrid within-person biospecimen pooling with regression calibration is a cost-effective method for estimating β when biomarkers are variable and costly. Its accuracy depends on the relationship between PE and IIV—unknown before pooling. If PE is excessive, bias can occur, but our method provides a post-experiment correction, making it ideal for studies with high biomarker variability, like environmental phenols.

Zenodo (CERN European Organization for Nuclear Research)
California University of Pennsylvania (US), University of Pennsylvania (US)
Life in Land
Openalex Percentile: Top 40%
Health, Environment, Cognitive Aging
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