In the field of membrane protein structural biology, chance only favors the sample which is properly prepared

Small membrane proteins (<100 kDa) are most often ensconced entirely within the plane of the lipid bilayer and are sensitive to changes in their native environment, making them unstable and recalcitrant targets of X-ray crystallography upon being extracted from the membrane. In the past decade, single particle cryo-electron microscopy (cryo-EM) has established itself as the method of choice for determination of high-resolution small membrane protein structures, primarily because it negates the requirement of high-quality diffracting crystals. However, the lack of conspicuous extra-membranous soluble domains, and the lack of asymmetry in the shape of the small membrane proteins by virtue of them being embedded entirely within detergent micelles, can affect particle alignment and cause challenges in data processing. Overcoming these challenges may require a combination of strategies that include protein expression construct engineering, optimization of sample preparation conditions, reconstitution of proteins in membrane mimetic environments, complexation with small molecule ligands and fiducial markers that can enhance the protein stability and size, and even employment of electron detectors with optimal detective quantum efficiency performance. My talk will use examples from my firsthand experience to demonstrate the applicability of these strategies to discover novel aspects, albeit sometimes serendipitously, of different classes of small membrane proteins from humans.

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Publication Details

Journal
Structural Dynamics
Published
2025-09-01
DOI
https://doi.org/10.1063/4.0000820
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

In the field of membrane protein structural biology, chance only favors the sample which is properly prepared

Structural Dynamics
Advanced Electron Microscopy Techniques and Applications
article

In the field of membrane protein structural biology, chance only favors the sample which is properly prepared

article en

Abstract

Small membrane proteins (<100 kDa) are most often ensconced entirely within the plane of the lipid bilayer and are sensitive to changes in their native environment, making them unstable and recalcitrant targets of X-ray crystallography upon being extracted from the membrane. In the past decade, single particle cryo-electron microscopy (cryo-EM) has established itself as the method of choice for determination of high-resolution small membrane protein structures, primarily because it negates the requirement of high-quality diffracting crystals. However, the lack of conspicuous extra-membranous soluble domains, and the lack of asymmetry in the shape of the small membrane proteins by virtue of them being embedded entirely within detergent micelles, can affect particle alignment and cause challenges in data processing. Overcoming these challenges may require a combination of strategies that include protein expression construct engineering, optimization of sample preparation conditions, reconstitution of proteins in membrane mimetic environments, complexation with small molecule ligands and fiducial markers that can enhance the protein stability and size, and even employment of electron detectors with optimal detective quantum efficiency performance. My talk will use examples from my firsthand experience to demonstrate the applicability of these strategies to discover novel aspects, albeit sometimes serendipitously, of different classes of small membrane proteins from humans.

Structural DynamicsVol. 12(5_Supplement)
University of Michigan (US)
Openalex Percentile: Top 25%
Advanced Electron Microscopy Techniques and Applications
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In the field of membrane protein structural biology, chance only favors the sample which is properly prepared · Structural Dynamics (2025) | TGRS Research Map | TGRS