Towards direct visualization of the reaction coordinates of proteins

As for man-made machines, the functional cycles of enzymes and other proteins involve the coordinated motion of their parts. These motions, and the mechanical properties of proteins more generally, therefore link protein structure, function, and evolution. For many proteins, experimental access to protein mechanics remains elusive. I will describe our efforts to access these dynamics by electric field-stimulated X-ray crystallography and complementary methods. I will illustrate this approach using two examples: our work on the direct visualization of K+ ion permeation through an ion channel, and on the dissection of structural intermediates enzymatic cycle of dihydrofolate reductase.

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Publication Details

Journal
Structural Dynamics
Published
2025-09-01
DOI
https://doi.org/10.1063/4.0001050
Primary Topic
Education, Psychology, and Social Research
Type
article
Field-Weighted Citation Impact
0.00
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article

Towards direct visualization of the reaction coordinates of proteins

Structural Dynamics
Education, Psychology, and Social Research
article

Towards direct visualization of the reaction coordinates of proteins

article en

Abstract

As for man-made machines, the functional cycles of enzymes and other proteins involve the coordinated motion of their parts. These motions, and the mechanical properties of proteins more generally, therefore link protein structure, function, and evolution. For many proteins, experimental access to protein mechanics remains elusive. I will describe our efforts to access these dynamics by electric field-stimulated X-ray crystallography and complementary methods. I will illustrate this approach using two examples: our work on the direct visualization of K+ ion permeation through an ion channel, and on the dissection of structural intermediates enzymatic cycle of dihydrofolate reductase.

Structural DynamicsVol. 12(5_Supplement)
D. E. Shaw Research (US), Harvard University Press (US), SLAC National Accelerator Laboratory (US), University of Chicago (US), New York University (US), Stanford University (US)
Openalex Percentile: Top 33%
Education, Psychology, and Social Research
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