Collagen V1 mediated integrin signaling regulates clonal muscle growth via the generation of a dominant stem cell niche.

scRNA-Seq dataset generated from isolated muscle stem cells (MuSCs) in TgBAC(pax3:GFP); TgBAC(meox1:mCherry) zebrafish line. This line was validated to accurately label growth-specific MuSCs within the external cell layer (ECL). Four developmental stages — 6, 21, 50, and 90 days post-fertilisation — were examined, representing key timepoints of clonal drift in zebrafish muscle growth. Fluorescence-activated Cell Sorting (FACS) was performed to isolate double-positive MuSCs, followed by sequencing via 10X GEM (10,000 cells/sample). Uploaded data includes raw fastq sequencing files and processed rds files (Seurat objects).

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-10-12
DOI
https://doi.org/10.5281/zenodo.17335712
Primary Topic
Cell Adhesion Molecules Research
Type
article
Field-Weighted Citation Impact
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article

Collagen V1 mediated integrin signaling regulates clonal muscle growth via the generation of a dominant stem cell niche.

Zenodo (CERN European Organization for Nuclear Research)
Cell Adhesion Molecules Research
article

Collagen V1 mediated integrin signaling regulates clonal muscle growth via the generation of a dominant stem cell niche.

article en

Abstract

scRNA-Seq dataset generated from isolated muscle stem cells (MuSCs) in TgBAC(pax3:GFP); TgBAC(meox1:mCherry) zebrafish line. This line was validated to accurately label growth-specific MuSCs within the external cell layer (ECL). Four developmental stages — 6, 21, 50, and 90 days post-fertilisation — were examined, representing key timepoints of clonal drift in zebrafish muscle growth. Fluorescence-activated Cell Sorting (FACS) was performed to isolate double-positive MuSCs, followed by sequencing via 10X GEM (10,000 cells/sample). Uploaded data includes raw fastq sequencing files and processed rds files (Seurat objects).

Zenodo (CERN European Organization for Nuclear Research)
The University of Melbourne (AU), Peter MacCallum Cancer Centre (AU), Australian Regenerative Medicine Institute (AU), Monash University (AU), Institut Curie (FR)
Openalex Percentile: Top 35%
Cell Adhesion Molecules Research
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Collagen V1 mediated integrin signaling regulates clonal muscle growth via the generation of a dominant stem cell niche. · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS