Towards Automatic Segmentation: Preprocessing Histological Images with Filters and Contrast Enhancement

Chagas disease and toxoplasmosis are highly relevant to public health concerns. To investigate parasitic load and treatment efficacy, several studies have been conducted, with the quantification of intracellular parasites being a crucial step. Currently, this process is performed manually through microscopic observation, which limits the efficiency and standardization of the results. This work proposes the use of digital image processing techniques by applying filtering, contrast enhancement, and detection algorithms to improve the analysis of these images. In this study, 22 images were evaluated and processed using Python, applying Gaussian, Mean, and Bilateral filters, along with contrast enhancement techniques such as CLAHE and Unsharp Mask. The best combinations of filters and parameters were assessed using the Carneiro Contrast Index (CCI) and Neighborhood Valley Emphasis (NVE) metrics. The results indicated that CLAHE was more effective at enhancing contrast, while Unsharp Mask achieved better segmentability scores. It was concluded that a balance between CCI and NVE provides the most suitable approach to optimize image quality for subsequent segmentation.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-10-15
DOI
https://doi.org/10.5281/zenodo.17363195
Primary Topic
Digital Imaging for Blood Diseases
Type
article
Field-Weighted Citation Impact
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article

Towards Automatic Segmentation: Preprocessing Histological Images with Filters and Contrast Enhancement

Zenodo (CERN European Organization for Nuclear Research)
Digital Imaging for Blood Diseases
article

Towards Automatic Segmentation: Preprocessing Histological Images with Filters and Contrast Enhancement

article en

Abstract

Chagas disease and toxoplasmosis are highly relevant to public health concerns. To investigate parasitic load and treatment efficacy, several studies have been conducted, with the quantification of intracellular parasites being a crucial step. Currently, this process is performed manually through microscopic observation, which limits the efficiency and standardization of the results. This work proposes the use of digital image processing techniques by applying filtering, contrast enhancement, and detection algorithms to improve the analysis of these images. In this study, 22 images were evaluated and processed using Python, applying Gaussian, Mean, and Bilateral filters, along with contrast enhancement techniques such as CLAHE and Unsharp Mask. The best combinations of filters and parameters were assessed using the Carneiro Contrast Index (CCI) and Neighborhood Valley Emphasis (NVE) metrics. The results indicated that CLAHE was more effective at enhancing contrast, while Unsharp Mask achieved better segmentability scores. It was concluded that a balance between CCI and NVE provides the most suitable approach to optimize image quality for subsequent segmentation.

Zenodo (CERN European Organization for Nuclear Research)
Universidade Federal de Uberlândia (BR)
Openalex Percentile: Top 44%
Digital Imaging for Blood Diseases
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Towards Automatic Segmentation: Preprocessing Histological Images with Filters and Contrast Enhancement · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS