Predictive Modeling of Stochastic Transcriptional Burst Dynamics in Single Neurons via Hierarchical Transformer Networks with Adaptive Temporal Resolution

**Abstract:** Single-neuron transcriptional bursting is a fundamental process in neural circuit function, influencing synaptic plasticity, network activity, and ultimately, cognitive behavior. However, accurately modeling the complex spatio-temporal dynamics of these bursts remains a significant challenge. This paper introduces a novel predictive modeling framework leveraging hierarchical transformer networks augmented with adaptive temporal resolution control to capture the stochasticity and long-range dependencies inherent in neuronal transcription. Our approach combines aspects of time-series analysis, deep learning, and stochastic differential equations to provide a highly accurate and interpretable model, enabling both predictive simulations and insights into the underlying molecular mechanisms. This technology holds significant potential for drug discovery, personalized medicine, and understanding the pathogenesis of neurological disorders.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-10-07
DOI
https://doi.org/10.5281/zenodo.17289140
Primary Topic
Hepatitis C virus research
Type
article
Field-Weighted Citation Impact
0.00
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article

Predictive Modeling of Stochastic Transcriptional Burst Dynamics in Single Neurons via Hierarchical Transformer Networks with Adaptive Temporal Resolution

Zenodo (CERN European Organization for Nuclear Research)
Hepatitis C virus research
article

Predictive Modeling of Stochastic Transcriptional Burst Dynamics in Single Neurons via Hierarchical Transformer Networks with Adaptive Temporal Resolution

article en

Abstract

**Abstract:** Single-neuron transcriptional bursting is a fundamental process in neural circuit function, influencing synaptic plasticity, network activity, and ultimately, cognitive behavior. However, accurately modeling the complex spatio-temporal dynamics of these bursts remains a significant challenge. This paper introduces a novel predictive modeling framework leveraging hierarchical transformer networks augmented with adaptive temporal resolution control to capture the stochasticity and long-range dependencies inherent in neuronal transcription. Our approach combines aspects of time-series analysis, deep learning, and stochastic differential equations to provide a highly accurate and interpretable model, enabling both predictive simulations and insights into the underlying molecular mechanisms. This technology holds significant potential for drug discovery, personalized medicine, and understanding the pathogenesis of neurological disorders.

Zenodo (CERN European Organization for Nuclear Research)
Freed–Hardeman University (US)
Openalex Percentile: Top 38%
Hepatitis C virus research
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