Automated Anomaly Detection and Correction in High-Dimensional Clinical Time-Series Data Using Robust Dimensionality Reduction and Bayesian Filtering

**Abstract:** The increasing complexity and volume of clinical time-series data, such as continuous glucose monitoring (CGM) and electrocardiogram (ECG) recordings, presents significant challenges for anomaly detection and correction. Existing methods often struggle with high dimensionality, non-stationarity, and the presence of noise. This paper introduces a novel framework, Robust Dimensionality Reduction and Bayesian Filtering (RDBF), for automated anomaly detection and correction in high-dimensional clinical time-series data. RDBF combines sparse principal component analysis (sPCA) with a Bayesian filtering approach to effectively reduce dimensionality, identify anomalous patterns, and dynamically correct for measurement errors. The approach exploits sparsity to efficiently represent the data while the Bayesian filter incorporates prior knowledge about physiological processes to improve anomaly detection accuracy and robustness. Demonstrations using simulated CGM data and a small dataset of real ECG recordings show promising results, achieving a >95% detection rate for simulated anomalies and a 15% improvement in accuracy compared to standard Kalman filtering on the ECG data. The framework is readily deployable and adaptable to various clinical time-series applications.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-10-01
DOI
https://doi.org/10.5281/zenodo.17246545
Primary Topic
Ecology and Vegetation Dynamics Studies
Type
article
Field-Weighted Citation Impact
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article

Automated Anomaly Detection and Correction in High-Dimensional Clinical Time-Series Data Using Robust Dimensionality Reduction and Bayesian Filtering

Zenodo (CERN European Organization for Nuclear Research)
Ecology and Vegetation Dynamics Studies
article

Automated Anomaly Detection and Correction in High-Dimensional Clinical Time-Series Data Using Robust Dimensionality Reduction and Bayesian Filtering

article en

Abstract

**Abstract:** The increasing complexity and volume of clinical time-series data, such as continuous glucose monitoring (CGM) and electrocardiogram (ECG) recordings, presents significant challenges for anomaly detection and correction. Existing methods often struggle with high dimensionality, non-stationarity, and the presence of noise. This paper introduces a novel framework, Robust Dimensionality Reduction and Bayesian Filtering (RDBF), for automated anomaly detection and correction in high-dimensional clinical time-series data. RDBF combines sparse principal component analysis (sPCA) with a Bayesian filtering approach to effectively reduce dimensionality, identify anomalous patterns, and dynamically correct for measurement errors. The approach exploits sparsity to efficiently represent the data while the Bayesian filter incorporates prior knowledge about physiological processes to improve anomaly detection accuracy and robustness. Demonstrations using simulated CGM data and a small dataset of real ECG recordings show promising results, achieving a >95% detection rate for simulated anomalies and a 15% improvement in accuracy compared to standard Kalman filtering on the ECG data. The framework is readily deployable and adaptable to various clinical time-series applications.

Zenodo (CERN European Organization for Nuclear Research)
Freed–Hardeman University (US)
Openalex Percentile: Top 40%
Ecology and Vegetation Dynamics Studies
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