Language Enhanced Model for Eye (LEME): An Open-Source Ophthalmology-Specific Large Language Model.

Large Language Models (LLMs) are poised to revolutionize healthcare. Ophthalmology-specific LLMs remain scarce and underexplored. We introduced an open-source, specialized LLM for ophthalmology, termed Language Enhanced Model for Eye (LEME). LEME was initially pre-trained on the Llama2 70B framework and further fine-tuned with a corpus of ~127,000 non-copyrighted training instances curated from ophthalmology-specific case reports, abstracts, and open-source study materials. We benchmarked LEME against eight other LLMs, namely, GPT-3.5, GPT-4, three Llama2 models (7B, 13B, 70B), PMC-LLAMA 13B, Meditron 70B, and EYE-Llama (another ophthalmology-specific LLM). Evaluations included four internal validation tasks: abstract completion, fill-in-the-blank, multiple-choice questions (MCQ), and short-answer QA. External validation tasks encompassed long-form QA, MCQ, patient EHR summarization, and clinical QA. Evaluation metrics included Rouge-L scores, accuracy, and expert evaluation of correctness, completeness, and readability. In internal validations, LEME consistently outperformed its counterparts, achieving Rouge-L scores of 0.20 ± 0.03 in abstract completion (all p<0.05), 0.82 ± 0.04 in fill-in-the-blank (all p<0.0001), and 0.22 ± 0.05 in short-answer QA (all p<0.0001, except versus GPT-4). In external validations, LEME excelled in long-form QA with a Rouge-L of 0.19 ± 0.01 (all p<0.0001), ranked second in MCQ accuracy (0.68 ± 0.09; all p<0.0001), and scored highest in EHR summarization and clinical QA (ranging from 4.24 to 4.83 out of 5 for correctness, completeness, and readability). LEME's emphasis on robust fine-tuning and the use of non-copyrighted data represents a breakthrough in open-source ophthalmology-specific LLMs, offering the potential to revolutionize execution of clinical tasks while democratizing research collaboration.

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Publication Details

Journal
PubMed
Published
2024-10-01
Primary Topic
Construction Engineering and Safety
Type
article
Field-Weighted Citation Impact
0.00

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article

Language Enhanced Model for Eye (LEME): An Open-Source Ophthalmology-Specific Large Language Model.

PubMed
Construction Engineering and Safety
article

Language Enhanced Model for Eye (LEME): An Open-Source Ophthalmology-Specific Large Language Model.

article en

Abstract

Large Language Models (LLMs) are poised to revolutionize healthcare. Ophthalmology-specific LLMs remain scarce and underexplored. We introduced an open-source, specialized LLM for ophthalmology, termed Language Enhanced Model for Eye (LEME). LEME was initially pre-trained on the Llama2 70B framework and further fine-tuned with a corpus of ~127,000 non-copyrighted training instances curated from ophthalmology-specific case reports, abstracts, and open-source study materials. We benchmarked LEME against eight other LLMs, namely, GPT-3.5, GPT-4, three Llama2 models (7B, 13B, 70B), PMC-LLAMA 13B, Meditron 70B, and EYE-Llama (another ophthalmology-specific LLM). Evaluations included four internal validation tasks: abstract completion, fill-in-the-blank, multiple-choice questions (MCQ), and short-answer QA. External validation tasks encompassed long-form QA, MCQ, patient EHR summarization, and clinical QA. Evaluation metrics included Rouge-L scores, accuracy, and expert evaluation of correctness, completeness, and readability. In internal validations, LEME consistently outperformed its counterparts, achieving Rouge-L scores of 0.20 ± 0.03 in abstract completion (all p<0.05), 0.82 ± 0.04 in fill-in-the-blank (all p<0.0001), and 0.22 ± 0.05 in short-answer QA (all p<0.0001, except versus GPT-4). In external validations, LEME excelled in long-form QA with a Rouge-L of 0.19 ± 0.01 (all p<0.0001), ranked second in MCQ accuracy (0.68 ± 0.09; all p<0.0001), and scored highest in EHR summarization and clinical QA (ranging from 4.24 to 4.83 out of 5 for correctness, completeness, and readability). LEME's emphasis on robust fine-tuning and the use of non-copyrighted data represents a breakthrough in open-source ophthalmology-specific LLMs, offering the potential to revolutionize execution of clinical tasks while democratizing research collaboration.

PubMed
Massachusetts Eye and Ear Infirmary (US), National Institutes of Health (US), Harvard University (US), National University of Singapore (SG), Singapore National Eye Center (SG), Yale University (US), Singapore Eye Research Institute (SG), Duke-NUS Medical School (SG), National Cancer Institute (US), Center for Cancer Research (US)
National Institutes of Health, Medical Research Council, National Medical Research Council, U.S. National Library of Medicine
Quality Education
Openalex Percentile: Top 54%
Construction Engineering and Safety
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