Cataloging the global microbiome. Very big data for very small things

The global microbiome is the collection of all microbes living on planet Earth. To study this system, we have developed approaches and methods to catalog this habitat, resulting in the Global Microbial Gene Catalog, version 1 (GMGCv1) and SPIRE, a collection of metagenome-assembled genomes (MAGs). Recently, we have expanded this work to also include small open reading frames (we currently consider all open reading frames ≥10 amino acids). We first built a catalogue of smorfs, which contains almost 1 billion sequences.

Publication Details

Published
2025-09-09
DOI
https://doi.org/10.52843/cassyni.jw2txt
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

Cataloging the global microbiome. Very big data for very small things

Genomics and Phylogenetic Studies
article

Cataloging the global microbiome. Very big data for very small things

article en

Abstract

The global microbiome is the collection of all microbes living on planet Earth. To study this system, we have developed approaches and methods to catalog this habitat, resulting in the Global Microbial Gene Catalog, version 1 (GMGCv1) and SPIRE, a collection of metagenome-assembled genomes (MAGs). Recently, we have expanded this work to also include small open reading frames (we currently consider all open reading frames ≥10 amino acids). We first built a catalogue of smorfs, which contains almost 1 billion sequences.

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Genomics and Phylogenetic Studies
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Cataloging the global microbiome. Very big data for very small things · (2025) | TGRS Research Map | TGRS