Semantic Information Extraction from Scholarly Papers and an Application

Scholarly papers are major vehicles for disseminating scientific discoveries, reporting experimental results, and communicating research ideas. A majority of the information in scholarly papers is unstructured data (i.e., text), which is challenging to organize, process, and analyze with computers. Extracting semantic information from textual content in scholarly papers and transforming it into structured or semi-structured data are crucial pre-processing steps for many downstream tasks. Traditionally, information extraction focuses on metadata and references. With the advancement of natural language processing and machine learning, deep learning models have been used to extract semantic information from textual content and use it as a representation of scholarly papers. This dissertation presents a major effort to develop machine learning and deep learning models to extract semantic information from the abstracts and full text of scholarly papers and the application of extracted features on a downstream task in the Science of Science. Specifically, we use machine learning models to extract theory and model entities, scientific claims, and acknowledgment entities, which represent the key semantic information but are hard to extract by heuristic methods. We highlight the technical contributions to overcome challenges, including using distant supervision and supervised contrastive learning to mitigate the data scarcity problem, and using named entity recognition (NER) along with a filter based on linguistic features to extract acknowledgment entities. We further report our efforts on applying extracted features to automatically assess the replicability of social and behavioral sciences papers, as well as to probe influential features in replicability assessment using explainable AI methods.

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Publication Details

Journal
ODU Digital Commons (Old Dominion University)
Published
2025-09-30
DOI
https://doi.org/10.25777/3prm-ya07
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
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article

Semantic Information Extraction from Scholarly Papers and an Application

ODU Digital Commons (Old Dominion University)
Geochemistry and Geologic Mapping
article

Semantic Information Extraction from Scholarly Papers and an Application

article en

Abstract

Scholarly papers are major vehicles for disseminating scientific discoveries, reporting experimental results, and communicating research ideas. A majority of the information in scholarly papers is unstructured data (i.e., text), which is challenging to organize, process, and analyze with computers. Extracting semantic information from textual content in scholarly papers and transforming it into structured or semi-structured data are crucial pre-processing steps for many downstream tasks. Traditionally, information extraction focuses on metadata and references. With the advancement of natural language processing and machine learning, deep learning models have been used to extract semantic information from textual content and use it as a representation of scholarly papers. This dissertation presents a major effort to develop machine learning and deep learning models to extract semantic information from the abstracts and full text of scholarly papers and the application of extracted features on a downstream task in the Science of Science. Specifically, we use machine learning models to extract theory and model entities, scientific claims, and acknowledgment entities, which represent the key semantic information but are hard to extract by heuristic methods. We highlight the technical contributions to overcome challenges, including using distant supervision and supervised contrastive learning to mitigate the data scarcity problem, and using named entity recognition (NER) along with a filter based on linguistic features to extract acknowledgment entities. We further report our efforts on applying extracted features to automatically assess the replicability of social and behavioral sciences papers, as well as to probe influential features in replicability assessment using explainable AI methods.

ODU Digital Commons (Old Dominion University)
Dominion University College (GH), Old Dominion University (US)
Quality Education
Openalex Percentile: Top 25%
Geochemistry and Geologic Mapping
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Semantic Information Extraction from Scholarly Papers and an Application · ODU Digital Commons (Old Dominion University) (2025) | TGRS Research Map | TGRS