ssGSEA from BulkRNAseq

For ssGSEA(v.2.0; Broad Institute) of proteomic data, Hallmark and Wikipathway gene signatures (MSigDB)(16) were used with GenePattern(17). WGCNA(18) was used to identify clusters. The enrichment analysis of Gene ontology terms for Biological Processes (v2023) was performed using EnrichR(19).

Institutions

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-09-16
DOI
https://doi.org/10.5281/zenodo.15425009
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

ssGSEA from BulkRNAseq

Zenodo (CERN European Organization for Nuclear Research)
Geochemistry and Geologic Mapping
article

ssGSEA from BulkRNAseq

article en

Abstract

For ssGSEA(v.2.0; Broad Institute) of proteomic data, Hallmark and Wikipathway gene signatures (MSigDB)(16) were used with GenePattern(17). WGCNA(18) was used to identify clusters. The enrichment analysis of Gene ontology terms for Biological Processes (v2023) was performed using EnrichR(19).

Zenodo (CERN European Organization for Nuclear Research)
Brigham and Women's Hospital (US)
Openalex Percentile: Top 42%
Geochemistry and Geologic Mapping
DOIOpen Access PDFOpenAlex
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

ssGSEA from BulkRNAseq · Zenodo (CERN European Organization for Nuclear Research) (2024) | TGRS Research Map | TGRS