Insights gained into Vascular Streak Dieback, an Emerging Disease of Woody Ornamentals in the United States, using Metagenomic Sequencing

This record hosts the Kraken2 classification outputs that support the manuscript “Insights gained into Vascular Streak Dieback, an Emerging Disease of Woody Ornamentals in the United States, using Metagenomic Sequencing.” The archive (csp_krakenoutputs2.tar.gz, 5.8 GB; MD5 shown on record) contains per-sample Kraken2 results and reports plus consolidated summary tables used in the analyses/figures. The fungi + oomycetes reference database used for classification is not included due to size restrictions; instead, an accession list is provided so the database can be reconstructed for full reproducibility. Files are organized by sample ID and can be re-summarized with standard Kraken2 utilities. Please cite this Zenodo record alongside the manuscript when using these outputs.

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-09-27
DOI
https://doi.org/10.5281/zenodo.17216345
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
0.00
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article

Insights gained into Vascular Streak Dieback, an Emerging Disease of Woody Ornamentals in the United States, using Metagenomic Sequencing

Zenodo (CERN European Organization for Nuclear Research)
Geochemistry and Geologic Mapping
article

Insights gained into Vascular Streak Dieback, an Emerging Disease of Woody Ornamentals in the United States, using Metagenomic Sequencing

article en

Abstract

This record hosts the Kraken2 classification outputs that support the manuscript “Insights gained into Vascular Streak Dieback, an Emerging Disease of Woody Ornamentals in the United States, using Metagenomic Sequencing.” The archive (csp_krakenoutputs2.tar.gz, 5.8 GB; MD5 shown on record) contains per-sample Kraken2 results and reports plus consolidated summary tables used in the analyses/figures. The fungi + oomycetes reference database used for classification is not included due to size restrictions; instead, an accession list is provided so the database can be reconstructed for full reproducibility. Files are organized by sample ID and can be re-summarized with standard Kraken2 utilities. Please cite this Zenodo record alongside the manuscript when using these outputs.

Zenodo (CERN European Organization for Nuclear Research)
Life in Land
Openalex Percentile: Top 26%
Geochemistry and Geologic Mapping
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