STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data

This is the initial release of STAHD, corresponding to the version used in the manuscript "STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data". This release provides a snapshot of the code and dependencies used to perform the experiments presented in the paper. Implements the full STAHD pipeline Includes scripts for preprocessing, training, and evaluation Compatible with the datasets used in the manuscript DOI provided via Zenodo: https://doi.org/10.5281/zenodo.17214602

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-09-27
DOI
https://doi.org/10.5281/zenodo.17214601
Primary Topic
Computational and Text Analysis Methods
Type
article
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article

STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data

Zenodo (CERN European Organization for Nuclear Research)
Computational and Text Analysis Methods
article

STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data

article en

Abstract

This is the initial release of STAHD, corresponding to the version used in the manuscript "STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data". This release provides a snapshot of the code and dependencies used to perform the experiments presented in the paper. Implements the full STAHD pipeline Includes scripts for preprocessing, training, and evaluation Compatible with the datasets used in the manuscript DOI provided via Zenodo: https://doi.org/10.5281/zenodo.17214602

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 36%
Computational and Text Analysis Methods
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STAHD: a scalable and accurate method to detect spatial domains in high-resolution spatial transcriptomics data · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS