Novel, laboratory-independent device to measure extracellular enzymatic activity in soils

Here we introduce a novel laboratory-independent Soil Enzymatic Activity Reader (SEAR). The assessment of extracellular enzymatic activity is based on the reaction of enzymes in a reactive layer of homogenized soil with fluorogenic substrates upon contact with an agarose gel in which they are dissolved. The reaction products are detected on the opposite side of the transparent gel by their fluorescence. Reaction plates with multiple gel compartments allow for the simultaneous assessment of several enzymes, including analytical replicates and suitable controls. We validated the new method by using sand, spiked with solutions of increasing concentrations of different enzymes. We further constrained the boundary conditions of operation, including limits of rate detection, precision, and the ranges of substrate concentrations, soil properties, and environmental conditions. We found our method to operate well for a wide range of different soils, comprising textures from sand to silty clay loam, acid forest soils with pH < 4 to carbonate containing agricultural soils, and soil organic carbon contents up to 18%. Furthermore, by successfully testing soil moistures from 2% to 173% of the respective water holding capacity and temperatures from 6 °C to 50 °C, we could show that measurements are possible under most conditions encountered in the field. We conclude that with SEAR, a novel device is available that allows fast, easy, and standardized measurements of extracellular enzymatic activity close to field conditions without laboratory access and thus without the need for storage and related sample pretreatments that may affect the results.

Institutions

Publication Details

Journal
Frontiers in Environmental Science
Published
2025-09-23
DOI
https://doi.org/10.3389/fenvs.2025.1663635
Citations
1
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
2.48

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Novel, laboratory-independent device to measure extracellular enzymatic activity in soils

1 citations
Frontiers in Environmental Science
Geochemistry and Geologic Mapping
2.48
article

Novel, laboratory-independent device to measure extracellular enzymatic activity in soils

article en
1 citations

Abstract

Here we introduce a novel laboratory-independent Soil Enzymatic Activity Reader (SEAR). The assessment of extracellular enzymatic activity is based on the reaction of enzymes in a reactive layer of homogenized soil with fluorogenic substrates upon contact with an agarose gel in which they are dissolved. The reaction products are detected on the opposite side of the transparent gel by their fluorescence. Reaction plates with multiple gel compartments allow for the simultaneous assessment of several enzymes, including analytical replicates and suitable controls. We validated the new method by using sand, spiked with solutions of increasing concentrations of different enzymes. We further constrained the boundary conditions of operation, including limits of rate detection, precision, and the ranges of substrate concentrations, soil properties, and environmental conditions. We found our method to operate well for a wide range of different soils, comprising textures from sand to silty clay loam, acid forest soils with pH < 4 to carbonate containing agricultural soils, and soil organic carbon contents up to 18%. Furthermore, by successfully testing soil moistures from 2% to 173% of the respective water holding capacity and temperatures from 6 °C to 50 °C, we could show that measurements are possible under most conditions encountered in the field. We conclude that with SEAR, a novel device is available that allows fast, easy, and standardized measurements of extracellular enzymatic activity close to field conditions without laboratory access and thus without the need for storage and related sample pretreatments that may affect the results.

Frontiers in Environmental ScienceVol. 13
Electronics Corporation of India (IN), Swiss Federal Institute for Forest, Snow and Landscape Research (CH), ETH Zurich (CH), Institute of Plant Biology (HU)
Eidgenössische Technische Hochschule Zürich, Swiss Federal Institute for Forest, Snow and Landscape Research
Life below water
Openalex Percentile: Top 7%
Geochemistry and Geologic Mapping
2.48
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.