Predictive Adverse Drug Reaction Profiling via Multi-Modal Graph Neural Network Fusion of Proteomic and Genomic Data

**Abstract:** This paper introduces a novel framework for predicting adverse drug reactions (ADRs) with significantly improved accuracy and speed by fusing proteomic and genomic data using a multi-modal graph neural network (MM-GNN) architecture. Leveraging advances in high-throughput proteomics and genomics, combined with established graph representation learning techniques, we demonstrate a 1.8x improvement in ADR prediction accuracy compared to single-omics approaches, alongside a 3.5x reduction in prediction latency. The system is commercially viable within 3-5 years, fulfilling a critical need for personalized medicine and streamlined drug development pipelines.

Institutions

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-09-12
DOI
https://doi.org/10.5281/zenodo.17106468
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Predictive Adverse Drug Reaction Profiling via Multi-Modal Graph Neural Network Fusion of Proteomic and Genomic Data

Zenodo (CERN European Organization for Nuclear Research)
Geochemistry and Geologic Mapping
article

Predictive Adverse Drug Reaction Profiling via Multi-Modal Graph Neural Network Fusion of Proteomic and Genomic Data

article en

Abstract

**Abstract:** This paper introduces a novel framework for predicting adverse drug reactions (ADRs) with significantly improved accuracy and speed by fusing proteomic and genomic data using a multi-modal graph neural network (MM-GNN) architecture. Leveraging advances in high-throughput proteomics and genomics, combined with established graph representation learning techniques, we demonstrate a 1.8x improvement in ADR prediction accuracy compared to single-omics approaches, alongside a 3.5x reduction in prediction latency. The system is commercially viable within 3-5 years, fulfilling a critical need for personalized medicine and streamlined drug development pipelines.

Zenodo (CERN European Organization for Nuclear Research)
Freed–Hardeman University (US)
Openalex Percentile: Top 44%
Geochemistry and Geologic Mapping
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.