Additional data for Lj-SPHERE Hybrid Assembly

Supplementary information for the Hybrid Assembled Lotus japonicus (Lj)-SPHERE genomes, including the comparison to the previous Illumina-based asembled genomes. CSV files: ENA_Records: accessions for Illumina and ONT reads, and genome assembly per bacterial isolate. Quast: assembly statistics for Illumina and Hybrid assembled genomes. BUSCO: taxonomic check for Illumina and Hybrid assembled genomes. CheckM: taxonomic integrity quality check for Illumina and Hybrid assembled genomes. Genes: genome statistics for Illumina and Hybrid assembled genomes. Circularity: number and name of circular contigs and chromosomes for Hybrid assembled genomes. Plasmid_detection: number and name of plasmidial contigs for Hybrid assembled genomes. Taxonomy: taxonomic assignment of Hybrid assembled genomes. Glossary: Illumina: Illumina-based assembly HA: Hybrid Assembly ONT: Oxford Nanopore Technology

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-08-18
DOI
https://doi.org/10.5281/zenodo.15436901
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
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article

Additional data for Lj-SPHERE Hybrid Assembly

Zenodo (CERN European Organization for Nuclear Research)
Geochemistry and Geologic Mapping
article

Additional data for Lj-SPHERE Hybrid Assembly

article en

Abstract

Supplementary information for the Hybrid Assembled Lotus japonicus (Lj)-SPHERE genomes, including the comparison to the previous Illumina-based asembled genomes. CSV files: ENA_Records: accessions for Illumina and ONT reads, and genome assembly per bacterial isolate. Quast: assembly statistics for Illumina and Hybrid assembled genomes. BUSCO: taxonomic check for Illumina and Hybrid assembled genomes. CheckM: taxonomic integrity quality check for Illumina and Hybrid assembled genomes. Genes: genome statistics for Illumina and Hybrid assembled genomes. Circularity: number and name of circular contigs and chromosomes for Hybrid assembled genomes. Plasmid_detection: number and name of plasmidial contigs for Hybrid assembled genomes. Taxonomy: taxonomic assignment of Hybrid assembled genomes. Glossary: Illumina: Illumina-based assembly HA: Hybrid Assembly ONT: Oxford Nanopore Technology

Zenodo (CERN European Organization for Nuclear Research)
Aarhus University (DK), Arla Foods (Denmark) (DK)
Openalex Percentile: Top 61%
Geochemistry and Geologic Mapping
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