Zenodo Data Sharing and Data Reuse User Story: Reusable Pipelines, Reproducible Insights: The Role of NUPulmonary/utils

User story showcasing a real-world researcher's experience with data sharing and reuse in the Zenodo repository. This user story highlights the contributions of Rogan A. Grant and the Chandel Lab at Northwestern University Feinberg School of Medicine. They developed the NUPulmonary/utils repository to facilitate multi-omics data analysis in pulmonary research within the Division of Pulmonary and Critical Care Medicine. The repository offers curated R scripts and pipelines designed for single-cell RNA sequencing, spatial transcriptomics, and immune profiling. Zenodo GREI User Stories are supported by the National Institutes of Health (NIH) Office of Data Science Strategy/Office of the NIH Director pursuant to OTA-21-009, “Generalist Repository Ecosystem Initiative (GREI)” through through Other Transactions Agreement (OTA) Number 1OT2DB000013.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-07-25
DOI
https://doi.org/10.5281/zenodo.16971140
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
0.00
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article

Zenodo Data Sharing and Data Reuse User Story: Reusable Pipelines, Reproducible Insights: The Role of NUPulmonary/utils

Zenodo (CERN European Organization for Nuclear Research)
Geochemistry and Geologic Mapping
article

Zenodo Data Sharing and Data Reuse User Story: Reusable Pipelines, Reproducible Insights: The Role of NUPulmonary/utils

article en

Abstract

User story showcasing a real-world researcher's experience with data sharing and reuse in the Zenodo repository. This user story highlights the contributions of Rogan A. Grant and the Chandel Lab at Northwestern University Feinberg School of Medicine. They developed the NUPulmonary/utils repository to facilitate multi-omics data analysis in pulmonary research within the Division of Pulmonary and Critical Care Medicine. The repository offers curated R scripts and pipelines designed for single-cell RNA sequencing, spatial transcriptomics, and immune profiling. Zenodo GREI User Stories are supported by the National Institutes of Health (NIH) Office of Data Science Strategy/Office of the NIH Director pursuant to OTA-21-009, “Generalist Repository Ecosystem Initiative (GREI)” through through Other Transactions Agreement (OTA) Number 1OT2DB000013.

Zenodo (CERN European Organization for Nuclear Research)
Northwestern University (PH), European Organization for Nuclear Research (CH)
Openalex Percentile: Top 63%
Geochemistry and Geologic Mapping
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