Advancing predictive analytics in child malnutrition: Machine, ensemble and deep learning models with balanced class distribution for early detection of stunting and wasting

Child malnutrition remains a critical public health challenge in sub-Saharan Africa, with traditional surveillance methods proving inadequate for early detection and intervention. This study leverages advanced machine learning and deep learning techniques to revolutionize stunting and wasting prediction in Malawi, utilizing nationally representative World Bank's Living Standards Measurement Surveys (LSMS) data to develop robust predictive models capable of identifying at-risk children before clinical manifestations emerge. Seven classification algorithms were evaluated, including ensemble methods (Random Forest, XGBoost), Deep Neural Networks (DNN), and traditional approaches (SVM, Logistic Regression, KNN, Gradient Boosting). Class imbalance challenges were addressed through SMOTE implementation and strategic class weighting. Model performance was assessed using accuracy, precision, recall, F1-score, and AUC-ROC metrics across balanced datasets. Results demonstrate exceptional predictive capabilities, with Random Forest achieving perfect performance for wasting prediction (100 % accuracy, precision, recall, F1-score, and AUC-ROC) and near-perfect stunting classification (99.98 % accuracy). XGBoost demonstrated comparable excellence with 99.49 % accuracy for wasting and 95.52 % for stunting prediction. DNN showed strong performance (91.50 % wasting accuracy, 76.64 % stunting accuracy), while traditional methods exhibited moderate effectiveness, with logistic regression achieving the lowest performance (66.58 % wasting, 64.72 % stunting accuracy). These findings represent a paradigm shift toward proactive nutritional surveillance, enabling early identification of vulnerable populations through data-driven approaches. The superior performance of ensemble algorithms provides policymakers with powerful tools for evidence-based resource allocation and targeted interventions. Implementation of these predictive models within Malawi's health systems could significantly enhance early detection capabilities, facilitate timely nutritional interventions, and contribute substantially to achieving global nutrition targets while reducing childhood mortality rates. • Ensemble machine-learning models achieved up to 100% AUC-ROC in detecting acute child malnutrition. • Addressing severe class imbalance with SMOTE was decisive, boosting recall for rare wasting cases from 41% to 99%. • Integration of socioeconomic, anthropometric, and dietary indicators produced the highest predictive lift. • The proposed workflow offers ministries of health a plug-and-play pipeline for real-time malnutrition early-warning dashboards. • The study pinpoints maternal education and household food security as the top actionable levers for targeted intervention.

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Publication Details

Journal
Human Nutrition & Metabolism
Published
2025-08-14
DOI
https://doi.org/10.1016/j.hnm.2025.200340
Citations
7
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
17.37
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article

Advancing predictive analytics in child malnutrition: Machine, ensemble and deep learning models with balanced class distribution for early detection of stunting and wasting

7 citations
Human Nutrition & Metabolism
Geochemistry and Geologic Mapping
17.37
article

Advancing predictive analytics in child malnutrition: Machine, ensemble and deep learning models with balanced class distribution for early detection of stunting and wasting

article en
7 citations

Abstract

Child malnutrition remains a critical public health challenge in sub-Saharan Africa, with traditional surveillance methods proving inadequate for early detection and intervention. This study leverages advanced machine learning and deep learning techniques to revolutionize stunting and wasting prediction in Malawi, utilizing nationally representative World Bank's Living Standards Measurement Surveys (LSMS) data to develop robust predictive models capable of identifying at-risk children before clinical manifestations emerge. Seven classification algorithms were evaluated, including ensemble methods (Random Forest, XGBoost), Deep Neural Networks (DNN), and traditional approaches (SVM, Logistic Regression, KNN, Gradient Boosting). Class imbalance challenges were addressed through SMOTE implementation and strategic class weighting. Model performance was assessed using accuracy, precision, recall, F1-score, and AUC-ROC metrics across balanced datasets. Results demonstrate exceptional predictive capabilities, with Random Forest achieving perfect performance for wasting prediction (100 % accuracy, precision, recall, F1-score, and AUC-ROC) and near-perfect stunting classification (99.98 % accuracy). XGBoost demonstrated comparable excellence with 99.49 % accuracy for wasting and 95.52 % for stunting prediction. DNN showed strong performance (91.50 % wasting accuracy, 76.64 % stunting accuracy), while traditional methods exhibited moderate effectiveness, with logistic regression achieving the lowest performance (66.58 % wasting, 64.72 % stunting accuracy). These findings represent a paradigm shift toward proactive nutritional surveillance, enabling early identification of vulnerable populations through data-driven approaches. The superior performance of ensemble algorithms provides policymakers with powerful tools for evidence-based resource allocation and targeted interventions. Implementation of these predictive models within Malawi's health systems could significantly enhance early detection capabilities, facilitate timely nutritional interventions, and contribute substantially to achieving global nutrition targets while reducing childhood mortality rates. • Ensemble machine-learning models achieved up to 100% AUC-ROC in detecting acute child malnutrition. • Addressing severe class imbalance with SMOTE was decisive, boosting recall for rare wasting cases from 41% to 99%. • Integration of socioeconomic, anthropometric, and dietary indicators produced the highest predictive lift. • The proposed workflow offers ministries of health a plug-and-play pipeline for real-time malnutrition early-warning dashboards. • The study pinpoints maternal education and household food security as the top actionable levers for targeted intervention.

Human Nutrition & MetabolismVol. 42
Alliance for a Green Revolution in Africa (KE)
Zero hunger
Openalex Percentile: Top 1%
Geochemistry and Geologic Mapping
17.37
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