Pseudomolecule-scale genome assemblies of Drepanocaryum sewerzowii and Marmoritis complanata

The Nepetoideae, a subfamily of Lamiaceae (mint family), is rich in aromatic plants, many of which are sought after for their use as flavors and fragrances or for their medicinal properties. Here, we present genome assemblies for two species in Nepetiodeae: Drepanocaruym sewerzowii and Marmoritis complanata. Both assemblies were generated using Oxford Nanopore Q20 + reads with contigs anchored to nine pseudomolecules that resulted in 335 Mb and 305 Mb assemblies, respectively, and BUSCO scores above 95% for both the assembly and annotation. We furthermore provide a species tree for the Lamiaceae using only genome-derived gene models, complementing existing transcriptome and marker-based phylogenies.

Publication Details

Journal
White Rose Research Online (University of Leeds, The University of Sheffield, University of York)
Published
2024-10-07
Citations
1
Primary Topic
Theoretical and Computational Physics
Type
article
Field-Weighted Citation Impact
0.31

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article

Pseudomolecule-scale genome assemblies of Drepanocaryum sewerzowii and Marmoritis complanata

1 citations
White Rose Research Online (University of Leeds, The University of Sheffield, University of York)
Theoretical and Computational Physics
0.31
article

Pseudomolecule-scale genome assemblies of Drepanocaryum sewerzowii and Marmoritis complanata

article en
1 citations

Abstract

The Nepetoideae, a subfamily of Lamiaceae (mint family), is rich in aromatic plants, many of which are sought after for their use as flavors and fragrances or for their medicinal properties. Here, we present genome assemblies for two species in Nepetiodeae: Drepanocaruym sewerzowii and Marmoritis complanata. Both assemblies were generated using Oxford Nanopore Q20 + reads with contigs anchored to nine pseudomolecules that resulted in 335 Mb and 305 Mb assemblies, respectively, and BUSCO scores above 95% for both the assembly and annotation. We furthermore provide a species tree for the Lamiaceae using only genome-derived gene models, complementing existing transcriptome and marker-based phylogenies.

White Rose Research Online (University of Leeds, The University of Sheffield, University of York)
UK Research and Innovation, Directorate for Biological Sciences
Life in Land
Openalex Percentile: Top 39%
Theoretical and Computational Physics
0.31
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