[Protocol] Hi-C2B: optimized detection of chromosomal contacts within synchronized meiotic S. cerevisiae cells

Hi-C, a genome-wide chromosome conformation capture assay, is a powerful tool used to study three-dimensional genome organization by converting physical pairwise interactions into counts of pairwise interactions. To study the many temporally regulated facets of meiotic recombination in S. cerevisiae, the Hi-C assay must be robust such that fine- and wide-scale comparisons between genetic datasets can be made. Here we describe an updated protocol for Hi-C (Hi-C2B) that generates reproducible libraries of interaction data with low noise and for a relatively low cost.<p></p>

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Figshare
Published
2024-08-11
Primary Topic
DNA Repair Mechanisms
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article

[Protocol] Hi-C2B: optimized detection of chromosomal contacts within synchronized meiotic S. cerevisiae cells

Figshare
DNA Repair Mechanisms
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[Protocol] Hi-C2B: optimized detection of chromosomal contacts within synchronized meiotic S. cerevisiae cells

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Abstract

Hi-C, a genome-wide chromosome conformation capture assay, is a powerful tool used to study three-dimensional genome organization by converting physical pairwise interactions into counts of pairwise interactions. To study the many temporally regulated facets of meiotic recombination in S. cerevisiae, the Hi-C assay must be robust such that fine- and wide-scale comparisons between genetic datasets can be made. Here we describe an updated protocol for Hi-C (Hi-C2B) that generates reproducible libraries of interaction data with low noise and for a relatively low cost.<p></p>

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DNA Repair Mechanisms
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[Protocol] Hi-C2B: optimized detection of chromosomal contacts within synchronized meiotic S. cerevisiae cells · Figshare (2024) | TGRS Research Map | TGRS