A Deep Cox Mixture Model Approach to End-Stage Kidney Disease

Persons with end-stage kidney/renal disease (ESKD) require undergoing dialysis or receiving a kidney transplant. Ethnic minority groups are disproportionately affected by ESKD in the United States. Due to the large range of ethnic and socio-economic groups in the United States, the assumption of proportional hazards (PH), which is required for Cox regression, could easily be violated. Hence, a deep Cox mixture (DCM) model is utilized to identify and model latent subpopulations that better satisfy the PH assumption and leverage deep neural networks for improved performance. Data from USRDS on patients with ESKD is analyzed. We found that the DCM model has better performance overall compared to a Cox PH model in terms of Brier score and a time-dependent concordance index. Additionally, the DCM model has better performance for the smaller subpopulations, i.e., race/ethnicity, region of the United States, and rurality of the community the patient belongs.

Publication Details

Journal
Open PRAIRIE (South Dakota State University)
Published
2025-02-07
Primary Topic
Plant-derived Lignans Synthesis and Bioactivity
Type
article
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article

A Deep Cox Mixture Model Approach to End-Stage Kidney Disease

Open PRAIRIE (South Dakota State University)
Plant-derived Lignans Synthesis and Bioactivity
article

A Deep Cox Mixture Model Approach to End-Stage Kidney Disease

article en

Abstract

Persons with end-stage kidney/renal disease (ESKD) require undergoing dialysis or receiving a kidney transplant. Ethnic minority groups are disproportionately affected by ESKD in the United States. Due to the large range of ethnic and socio-economic groups in the United States, the assumption of proportional hazards (PH), which is required for Cox regression, could easily be violated. Hence, a deep Cox mixture (DCM) model is utilized to identify and model latent subpopulations that better satisfy the PH assumption and leverage deep neural networks for improved performance. Data from USRDS on patients with ESKD is analyzed. We found that the DCM model has better performance overall compared to a Cox PH model in terms of Brier score and a time-dependent concordance index. Additionally, the DCM model has better performance for the smaller subpopulations, i.e., race/ethnicity, region of the United States, and rurality of the community the patient belongs.

Open PRAIRIE (South Dakota State University)
Openalex Percentile: Top 51%
Plant-derived Lignans Synthesis and Bioactivity
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