Optimal sensing through phase separation

Biomolecular condensates form on timescales of seconds in cells upon environmental or compositional changes. Condensate formation is thus argued to act as a mechanism for sensing such changes and quickly initiating downstream processes, such as forming stress granules in response to heat stress and amplifying cGAS enzymatic activity upon detection of cytosolic DNA. Here, we show that phase separation allows cells to discriminate small concentration differences on finite, biologically relevant timescales. We propose optimal sensing protocols, which use the sharp onset of phase separation. We show how, given experimentally measured rates, cells can achieve rapid and robust sensing of concentration differences of 1% on a timescale of minutes, offering an alternative to classical biochemical mechanisms.

Publication Details

Journal
arXiv (Cornell University)
Published
2025-07-25
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
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article

Optimal sensing through phase separation

arXiv (Cornell University)
RNA Research and Splicing
article

Optimal sensing through phase separation

article en

Abstract

Biomolecular condensates form on timescales of seconds in cells upon environmental or compositional changes. Condensate formation is thus argued to act as a mechanism for sensing such changes and quickly initiating downstream processes, such as forming stress granules in response to heat stress and amplifying cGAS enzymatic activity upon detection of cytosolic DNA. Here, we show that phase separation allows cells to discriminate small concentration differences on finite, biologically relevant timescales. We propose optimal sensing protocols, which use the sharp onset of phase separation. We show how, given experimentally measured rates, cells can achieve rapid and robust sensing of concentration differences of 1% on a timescale of minutes, offering an alternative to classical biochemical mechanisms.

arXiv (Cornell University)
Reduced inequalities
Openalex Percentile: Top 51%
RNA Research and Splicing
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Optimal sensing through phase separation · arXiv (Cornell University) (2025) | TGRS Research Map | TGRS