Tripartite-GraphRAG via Plugin Ontologies

Large Language Models (LLMs) have shown remarkable capabilities across various domains, yet they struggle with knowledge-intensive tasks in areas that demand factual accuracy, e.g. industrial automation and healthcare. Key limitations include their tendency to hallucinate, lack of source traceability (provenance), and challenges in timely knowledge updates. Combining language models with knowledge graphs (GraphRAG) offers promising avenues for overcoming these deficits. However, a major challenge lies in creating such a knowledge graph in the first place. Here, we propose a novel approach that combines LLMs with a tripartite knowledge graph representation, which is constructed by connecting complex, domain-specific objects via a curated ontology of corresponding, domain-specific concepts to relevant sections within chunks of text through a concept-anchored pre-analysis of source documents starting from an initial lexical graph. Subsequently, we formulate LLM prompt creation as an unsupervised node classification problem allowing for the optimization of information density, coverage, and arrangement of LLM prompts at significantly reduced lengths. An initial experimental evaluation of our approach on a healthcare use case, involving multi-faceted analyses of patient anamneses given a set of medical concepts as well as a series of clinical guideline literature, indicates its potential to optimize information density, coverage, and arrangement of LLM prompts while significantly reducing their lengths, which, in turn, may lead to reduced costs as well as more consistent and reliable LLM outputs.