Bayesian Nowcasting with Laplacian-P-Splines

During an epidemic, the daily number of reported infected cases, deaths or hospitalizations is often lower than the actual number due to reporting delays. Nowcasting aims to estimate the cases that have not yet been reported and combine it with the already reported cases to obtain an estimate of the daily cases. In this article, we present a fast and flexible Bayesian approach for nowcasting by combining P-splines and Laplace approximations. Laplacian-P-splines provide a flexible framework for nowcasting that is computationally less demanding as compared to traditional Markov chain Monte Carlo techniques. The proposed approach also permits to naturally quantify the prediction uncertainty. Model performance is assessed through simulations and the nowcasting method is applied to COVID-19 mortality and incidence cases in Belgium. Supplementary materials for this article are available online.

Publication Details

Journal
Figshare
Published
2024-09-12
DOI
https://doi.org/10.6084/m9.figshare.27004201
Primary Topic
COVID-19 epidemiological studies
Type
article
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article

Bayesian Nowcasting with Laplacian-P-Splines

Figshare
COVID-19 epidemiological studies
article

Bayesian Nowcasting with Laplacian-P-Splines

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Abstract

During an epidemic, the daily number of reported infected cases, deaths or hospitalizations is often lower than the actual number due to reporting delays. Nowcasting aims to estimate the cases that have not yet been reported and combine it with the already reported cases to obtain an estimate of the daily cases. In this article, we present a fast and flexible Bayesian approach for nowcasting by combining P-splines and Laplace approximations. Laplacian-P-splines provide a flexible framework for nowcasting that is computationally less demanding as compared to traditional Markov chain Monte Carlo techniques. The proposed approach also permits to naturally quantify the prediction uncertainty. Model performance is assessed through simulations and the nowcasting method is applied to COVID-19 mortality and incidence cases in Belgium. Supplementary materials for this article are available online.

Figshare
Good health and well-being
Openalex Percentile: Top 54%
COVID-19 epidemiological studies
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