Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

The Template Wizard at NanoSafety Data Interface https://search.data.enanomapper.net/ provides an user-friendly online form that allows users to select a specific end-point and to specify essential information about the experiment they will perform and for which they require a data (and associated metadata) capture template. Specific HTS_METADATA template allow users to annotate HTS experimental data with meaningful metadata while ensuring consistency and harmonization. The template for HTS metadata include the following sheets: 1. Front sheet Well address: Specific well address from used plate (e.g. A1, A2,...) Sample name: Select the sample name from the drop-down menu, or enter it if it is no available. Sample code: Internal sample code (if you used) in your laboratory. Concentration: Used material concentration in ug/ml. 2. Files Replicate: Specific experimental replicate (e.g. S1, S2, or R1, R2, or 1, 2 ......) Time: Treatment time (e.g. 24h, 2 days, ....) Endpoint: Specific endpoint (Cell-TiterGlo, AlamarBlue ....) This cell could contain endpoints separated by "," because a single file (e.g. received txt files from a high-content imaging station) could contain more than one endpoint. Cell: Treated cell line Date: Date of experiment (optional) Filename: filename with experimental results with extension. * The "Files sheet" can be automatically populated if the filenames follow this specific format: Replicate_time_endpoint_cell.extension

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-12-02
DOI
https://doi.org/10.5281/zenodo.14260137
Citations
1
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.52
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article

Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

1 citations
Zenodo (CERN European Organization for Nuclear Research)
Advanced Electron Microscopy Techniques and Applications
0.52
article

Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

article en
1 citations

Abstract

The Template Wizard at NanoSafety Data Interface https://search.data.enanomapper.net/ provides an user-friendly online form that allows users to select a specific end-point and to specify essential information about the experiment they will perform and for which they require a data (and associated metadata) capture template. Specific HTS_METADATA template allow users to annotate HTS experimental data with meaningful metadata while ensuring consistency and harmonization. The template for HTS metadata include the following sheets: 1. Front sheet Well address: Specific well address from used plate (e.g. A1, A2,...) Sample name: Select the sample name from the drop-down menu, or enter it if it is no available. Sample code: Internal sample code (if you used) in your laboratory. Concentration: Used material concentration in ug/ml. 2. Files Replicate: Specific experimental replicate (e.g. S1, S2, or R1, R2, or 1, 2 ......) Time: Treatment time (e.g. 24h, 2 days, ....) Endpoint: Specific endpoint (Cell-TiterGlo, AlamarBlue ....) This cell could contain endpoints separated by "," because a single file (e.g. received txt files from a high-content imaging station) could contain more than one endpoint. Cell: Treated cell line Date: Date of experiment (optional) Filename: filename with experimental results with extension. * The "Files sheet" can be automatically populated if the filenames follow this specific format: Replicate_time_endpoint_cell.extension

Zenodo (CERN European Organization for Nuclear Research)
Plovdiv University (BG), IDEAconsult (BG)
Openalex Percentile: Top 17%
Advanced Electron Microscopy Techniques and Applications
0.52
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