NPLinker eScience Integrative Omics Mining Workshop Materials

These materials were used as a part of the second NPLinker eScience Workshop on Integrative Omics Mining held in Wageninge, the Netherlands, in March 2025: https://www.wur.nl/en/research-results/chair-groups/plant-sciences/bioinformatics/teaching/nplinker_workshop.htm Most materials are available in a format facilitating its reuse. When doing so, we kindly ask you to - where possible and appropriate - acknowledge and credit those that put effort in creating the slides and developing the methods. You will find information in the slide decks to do so. Please note that the materials also have a DOI through this Zenodo link that can be used to credit the workshop material. Thanks in advance on behalf of the instructors and organizers of the workshop. Whilst natural products discovery was a prime application area for the workshop, we do note that both genome mining and especially metabolome mining do have other application areas for which - sometimes with some modifications - the materials could be reused. We hope that this initiative will help to further foster teaching the future generation of omics miners, to aid in setting up teaching materials for genome mining, metabolomics, and metabolome mining, and to promote discussions in between and bring together the fields of genome mining and metabolome mining.

Institutions

Publication Details

Journal
Socio-Environmental Systems Modeling
Published
2025-04-25
DOI
https://doi.org/10.5281/zenodo.15281966
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
0.00
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NPLinker eScience Integrative Omics Mining Workshop Materials

Socio-Environmental Systems Modeling
Metabolomics and Mass Spectrometry Studies
article

NPLinker eScience Integrative Omics Mining Workshop Materials

article en

Abstract

These materials were used as a part of the second NPLinker eScience Workshop on Integrative Omics Mining held in Wageninge, the Netherlands, in March 2025: https://www.wur.nl/en/research-results/chair-groups/plant-sciences/bioinformatics/teaching/nplinker_workshop.htm Most materials are available in a format facilitating its reuse. When doing so, we kindly ask you to - where possible and appropriate - acknowledge and credit those that put effort in creating the slides and developing the methods. You will find information in the slide decks to do so. Please note that the materials also have a DOI through this Zenodo link that can be used to credit the workshop material. Thanks in advance on behalf of the instructors and organizers of the workshop. Whilst natural products discovery was a prime application area for the workshop, we do note that both genome mining and especially metabolome mining do have other application areas for which - sometimes with some modifications - the materials could be reused. We hope that this initiative will help to further foster teaching the future generation of omics miners, to aid in setting up teaching materials for genome mining, metabolomics, and metabolome mining, and to promote discussions in between and bring together the fields of genome mining and metabolome mining.

Socio-Environmental Systems Modeling
Leiden University (NL), Maastricht University (NL), University of California San Diego (US), Netherlands eScience Center (NL), University of Montana (US), Wageningen University & Research (NL), Technical University of Denmark (DK)
Industry, innovation and infrastructure
Openalex Percentile: Top 52%
Metabolomics and Mass Spectrometry Studies
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NPLinker eScience Integrative Omics Mining Workshop Materials · Socio-Environmental Systems Modeling (2025) | TGRS Research Map | TGRS