Open Science for the OMICS Community - Workshop 1: Essential Open Science for South Africa

About this Presentation This presentation was developed for Part 1 of a three-part Open Science for the OMICS Community Workshop Series, which Talarify created and DIPLOMICS hosted and supported. The workshop series and supporting workbooks specifically focus on Open Science in the South African context. The three parts include: Workshop 1: An Introduction To Open Science Workshop 2: Open Science in the Omics Research Laboratory Workshop 3: Open Science for Computational Omics Research DIPLOMICS is a research infrastructure programme funded by the South African Department of Science, Technology and Innovation (DSTI). One of DIPLOMICS’ primary objectives is to support training for students and researchers in Omics, defined as the Sciences of Genomics, Proteomics, Metabolomics, and Bioinformatics. Talarify is a South African consulting and training organisation specialising in capacity and community development in Open Science, Digital and Computational Research, and Interdisciplinarity. How to Use the Presentation The slides are supplemented by a comprehensive workbook, ESSENTIAL OPEN SCIENCE FOR SOUTH AFRICA, developed by the same authors. The contents of the workbook were designed to be used: as self-study material (in this case, we strongly recommend further reading using the reference materials); as a workbook complementing the interactive workshops run by facilitators with experience in open science. The workbook can be found at: Van der Walt, A., Pawlik, A., & GROBBELAAR, M. (2025, January 27). Open Science Essentials for South Africa. Zenodo. https://doi.org/10.5281/zenodo.14745124 Keeping the Information Current The information in these documents reflects and references, to the best of the authors’ knowledge, up to date recommendations and resources at publication. We aim to release updates to ensure the workbook and accompanying presentation stays current and usable. Should you have any suggestions for updating or extending the content, please contact [email protected]. Contributors will be acknowledged appropriately in future releases. All versions will be hosted on Zenodo. Re-using, Remixing, Reproducing This work is licensed under Creative Commons Attribution 4.0 International Expected Learning Outcomes After working through this workbook, learners will be able to: understand the concept of open science and its importance; recognise various key open science concepts (terminology/vocabulary); set up an account with ORCID and be able to use it; understand the basics of open licenses; understand the foundations of open-access publishing; describe the processes of data sharing; find useful open science resources, including tools, platforms, repositories, publications, communities, mentorship opportunities, and more; know about open science policies and recommendations relevant to the South African research community and have foundational knowledge, enabling them to attend a follow-up workshop to learn about applying open science principles in practice. Funding The South African Department of Science, Technology, and Innovation funded the development of this workbook through DIPLOMICS, a research infrastructure under the South African Research Infrastructure Roadmap initiative.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-01-28
DOI
https://doi.org/10.5281/zenodo.14755706
Primary Topic
Genetics, Bioinformatics, and Biomedical Research
Type
article
Field-Weighted Citation Impact
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article

Open Science for the OMICS Community - Workshop 1: Essential Open Science for South Africa

Zenodo (CERN European Organization for Nuclear Research)
Genetics, Bioinformatics, and Biomedical Research
article

Open Science for the OMICS Community - Workshop 1: Essential Open Science for South Africa

article en

Abstract

About this Presentation This presentation was developed for Part 1 of a three-part Open Science for the OMICS Community Workshop Series, which Talarify created and DIPLOMICS hosted and supported. The workshop series and supporting workbooks specifically focus on Open Science in the South African context. The three parts include: Workshop 1: An Introduction To Open Science Workshop 2: Open Science in the Omics Research Laboratory Workshop 3: Open Science for Computational Omics Research DIPLOMICS is a research infrastructure programme funded by the South African Department of Science, Technology and Innovation (DSTI). One of DIPLOMICS’ primary objectives is to support training for students and researchers in Omics, defined as the Sciences of Genomics, Proteomics, Metabolomics, and Bioinformatics. Talarify is a South African consulting and training organisation specialising in capacity and community development in Open Science, Digital and Computational Research, and Interdisciplinarity. How to Use the Presentation The slides are supplemented by a comprehensive workbook, ESSENTIAL OPEN SCIENCE FOR SOUTH AFRICA, developed by the same authors. The contents of the workbook were designed to be used: as self-study material (in this case, we strongly recommend further reading using the reference materials); as a workbook complementing the interactive workshops run by facilitators with experience in open science. The workbook can be found at: Van der Walt, A., Pawlik, A., & GROBBELAAR, M. (2025, January 27). Open Science Essentials for South Africa. Zenodo. https://doi.org/10.5281/zenodo.14745124 Keeping the Information Current The information in these documents reflects and references, to the best of the authors’ knowledge, up to date recommendations and resources at publication. We aim to release updates to ensure the workbook and accompanying presentation stays current and usable. Should you have any suggestions for updating or extending the content, please contact [email protected]. Contributors will be acknowledged appropriately in future releases. All versions will be hosted on Zenodo. Re-using, Remixing, Reproducing This work is licensed under Creative Commons Attribution 4.0 International Expected Learning Outcomes After working through this workbook, learners will be able to: understand the concept of open science and its importance; recognise various key open science concepts (terminology/vocabulary); set up an account with ORCID and be able to use it; understand the basics of open licenses; understand the foundations of open-access publishing; describe the processes of data sharing; find useful open science resources, including tools, platforms, repositories, publications, communities, mentorship opportunities, and more; know about open science policies and recommendations relevant to the South African research community and have foundational knowledge, enabling them to attend a follow-up workshop to learn about applying open science principles in practice. Funding The South African Department of Science, Technology, and Innovation funded the development of this workbook through DIPLOMICS, a research infrastructure under the South African Research Infrastructure Roadmap initiative.

Zenodo (CERN European Organization for Nuclear Research)
Manaaki Whenua – Landcare Research (NZ)
Industry, innovation and infrastructure
Openalex Percentile: Top 52%
Genetics, Bioinformatics, and Biomedical Research
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