Establishment and capacity analysis of the platelet donor database with HPA and HLA genotype in Nanjing

Objective To establish a known HPA/HLA genotype platelet donor database in Nanjing, analyze the polymorphism of HPA-1~6w, -15 and HLA-A, -B and evaluate the matching probability and appropriate capacity of the database for platelet matching transfusion. Methods HPA-1~6w, -15 and HLA-A, -B were genotyped by PCR-SSP and PCR-SBT, respectively. The allele frequency and haplotype frequency of HPA-1~6w, -15 and HLA-A,- B were calculated with SHEsis software, and then the matching probability and appropriate capacity were obtained according to the haplotype frequencies. Results The population genetic polymorphisms data of HPA-1~6w, -15 and HLA-A, -B in Nanjing were obtained. According to the subsequent calculating, without considering ABO blood type, in a database size of 527 donors, a patient with haplotype frequency >0.001 has approximate 95% probability to achieve matching of HPA-1~6w, -15 genotype. A database with a total size of 1 875 donors can afford the patient with haplotype frequency >0.001 to find at least 1 HLA-A, -B matched donor in 95% probability. Conclusion We established a local platelet donor database with known HPA and HLA genotype, which also provided important data support for the subsequent construction, maintenance and clinical application of the database.

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Publication Details

Journal
SHILAP Revista de lepidopterología
Published
2024-10-01
DOI
https://doi.org/10.13303/j.cjbt.issn.1004-549x.2024.10.006
Primary Topic
Wheat and Barley Genetics and Pathology
Type
article
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article

Establishment and capacity analysis of the platelet donor database with HPA and HLA genotype in Nanjing

SHILAP Revista de lepidopterología
Wheat and Barley Genetics and Pathology
article

Establishment and capacity analysis of the platelet donor database with HPA and HLA genotype in Nanjing

article en

Abstract

Objective To establish a known HPA/HLA genotype platelet donor database in Nanjing, analyze the polymorphism of HPA-1~6w, -15 and HLA-A, -B and evaluate the matching probability and appropriate capacity of the database for platelet matching transfusion. Methods HPA-1~6w, -15 and HLA-A, -B were genotyped by PCR-SSP and PCR-SBT, respectively. The allele frequency and haplotype frequency of HPA-1~6w, -15 and HLA-A,- B were calculated with SHEsis software, and then the matching probability and appropriate capacity were obtained according to the haplotype frequencies. Results The population genetic polymorphisms data of HPA-1~6w, -15 and HLA-A, -B in Nanjing were obtained. According to the subsequent calculating, without considering ABO blood type, in a database size of 527 donors, a patient with haplotype frequency >0.001 has approximate 95% probability to achieve matching of HPA-1~6w, -15 genotype. A database with a total size of 1 875 donors can afford the patient with haplotype frequency >0.001 to find at least 1 HLA-A, -B matched donor in 95% probability. Conclusion We established a local platelet donor database with known HPA and HLA genotype, which also provided important data support for the subsequent construction, maintenance and clinical application of the database.

SHILAP Revista de lepidopterología
Jiangsu Province Blood Center (CN)
Openalex Percentile: Top 33%
Wheat and Barley Genetics and Pathology
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Establishment and capacity analysis of the platelet donor database with HPA and HLA genotype in Nanjing · SHILAP Revista de lepidopterología (2024) | TGRS Research Map | TGRS