Deep-Red and UltrafastPhotocatalytic Proximity LabelingEmpowered <i>In Situ</i> Dissection of Tumor-Immune Interactionsin Primary Tissues

Immunotherapy efficacy in solid tumors varies greatly, influenced by the tumor microenvironment (TME) and the dynamic tumor-immune interactions within it. Decoding these interactions <i>in situ</i> with minimal interference with native tissue architecture and delicate immune responses is critical for understanding tumor progression and optimizing therapeutic strategies. Here, we introduce CAT-Tissue, a novel deep-red photocatalytic proximity labeling method that enables ultrafast, high-resolution profiling of tumor-immune interactions in primary tissues. By leveraging nanobody-Chlorin e6 as the photocatalyst and biotin-aniline as the probe, CAT-Tissue enabled the rapid and comprehensive detection of various tumor-immune interactions in both coculture systems and primary tumor sections. Coupled with bulk RNA-sequencing, CAT-Tissue revealed distinct gene expression patterns between tumor-neighboring and tumor-distal lymphocytes, highlighting the recognition and immune responses of tumor-neighboring CD8<sup>+</sup> T cells, which exhibited activated, effector, and exhausted phenotypes. By leveraging a deep-red photocatalytic proximity cell labeling strategy with excellent tissue penetration and biocompatibility, CAT-Tissue offers a nongenetically encoded platform with high sensitivity and spatiotemporal controllability for rapid profiling tumor-immune interactions within complex tissue environments <i>in situ</i>, which may advance our understanding of tumor immunology and guide the development of more effective immunotherapies.

Publication Details

Journal
Figshare
Published
2025-03-04
DOI
https://doi.org/10.1021/jacs.4c17879.s001
Primary Topic
Genetic Mapping and Diversity in Plants and Animals
Type
article
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article

Deep-Red and UltrafastPhotocatalytic Proximity LabelingEmpowered In Situ Dissection of Tumor-Immune Interactionsin Primary Tissues

Figshare
Genetic Mapping and Diversity in Plants and Animals
article

Deep-Red and UltrafastPhotocatalytic Proximity LabelingEmpowered In Situ Dissection of Tumor-Immune Interactionsin Primary Tissues

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Abstract

Immunotherapy efficacy in solid tumors varies greatly, influenced by the tumor microenvironment (TME) and the dynamic tumor-immune interactions within it. Decoding these interactions <i>in situ</i> with minimal interference with native tissue architecture and delicate immune responses is critical for understanding tumor progression and optimizing therapeutic strategies. Here, we introduce CAT-Tissue, a novel deep-red photocatalytic proximity labeling method that enables ultrafast, high-resolution profiling of tumor-immune interactions in primary tissues. By leveraging nanobody-Chlorin e6 as the photocatalyst and biotin-aniline as the probe, CAT-Tissue enabled the rapid and comprehensive detection of various tumor-immune interactions in both coculture systems and primary tumor sections. Coupled with bulk RNA-sequencing, CAT-Tissue revealed distinct gene expression patterns between tumor-neighboring and tumor-distal lymphocytes, highlighting the recognition and immune responses of tumor-neighboring CD8<sup>+</sup> T cells, which exhibited activated, effector, and exhausted phenotypes. By leveraging a deep-red photocatalytic proximity cell labeling strategy with excellent tissue penetration and biocompatibility, CAT-Tissue offers a nongenetically encoded platform with high sensitivity and spatiotemporal controllability for rapid profiling tumor-immune interactions within complex tissue environments <i>in situ</i>, which may advance our understanding of tumor immunology and guide the development of more effective immunotherapies.

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Openalex Percentile: Top 45%
Genetic Mapping and Diversity in Plants and Animals
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