MBX V1.2: AcceleratingData-Driven Many-Body MolecularDynamics Simulations

The MBX software provides an advanced platform for molecular dynamics simulations, leveraging state-of-the-art MB-pol and MB-nrg data-driven many-body potential energy functions. Developed over the past decade, these potential energy functions integrate physics-based and machine-learned many-body terms trained on electronic structure data calculated at the “gold standard” coupled-cluster level of theory. Recent advancements in MBX have focused on optimizing its performance, resulting in the release of MBX v1.2. While the inherently many-body nature of MB-pol and MB-nrg ensures high accuracy, it poses computational challenges. MBX v1.2 addresses these challenges with significant performance improvements, including enhanced parallelism that fully harnesses the power of modern multicore CPUs. These advancements enable simulations on nanosecond time scales for condensed-phase systems, significantly expanding the scope of high-accuracy, predictive simulations of complex molecular systems powered by data-driven many-body potential energy functions.

Publication Details

Journal
Figshare
Published
2025-02-14
DOI
https://doi.org/10.1021/acs.jctc.4c01333.s001
Primary Topic
Genetic diversity and population structure
Type
article
Field-Weighted Citation Impact
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article

MBX V1.2: AcceleratingData-Driven Many-Body MolecularDynamics Simulations

Figshare
Genetic diversity and population structure
article

MBX V1.2: AcceleratingData-Driven Many-Body MolecularDynamics Simulations

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Abstract

The MBX software provides an advanced platform for molecular dynamics simulations, leveraging state-of-the-art MB-pol and MB-nrg data-driven many-body potential energy functions. Developed over the past decade, these potential energy functions integrate physics-based and machine-learned many-body terms trained on electronic structure data calculated at the “gold standard” coupled-cluster level of theory. Recent advancements in MBX have focused on optimizing its performance, resulting in the release of MBX v1.2. While the inherently many-body nature of MB-pol and MB-nrg ensures high accuracy, it poses computational challenges. MBX v1.2 addresses these challenges with significant performance improvements, including enhanced parallelism that fully harnesses the power of modern multicore CPUs. These advancements enable simulations on nanosecond time scales for condensed-phase systems, significantly expanding the scope of high-accuracy, predictive simulations of complex molecular systems powered by data-driven many-body potential energy functions.

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MBX V1.2: AcceleratingData-Driven Many-Body MolecularDynamics Simulations · Figshare (2025) | TGRS Research Map | TGRS