A New Route\nto the Prebiotic Synthesis of Glycine\nvia <i>Ab Initio</i>-Based Machine Learning Calculations

In this work, we study the synthesis of glycine, the\nsimplest amino\nacid, using <i>ab initio</i> molecular dynamics and enhanced\nsampling techniques to explore and quantify novel potential pathways.\nOur protocol integrates state-of-the-art machine learning approaches,\nallowing us to sample relevant chemical spaces more efficiently. We\ndiscover a novel “oxyglycolate path”, distinct from\nthe “standard” Strecker mechanism, identify new intermediates,\nand provide a full thermodynamic characterization of all reaction\nsteps. This alternative pathway aligns better with meteoritic and\nexperimental observations, paving the way for further investigations.\nIntegrating quantum accuracy and machine learning in prebiotic chemistry\nrepresents a methodological milestone advancing the exploration of\nlife’s prebiotic origins.

Publication Details

Journal
Figshare
Published
2024-08-19
DOI
https://doi.org/10.1021/acs.jpclett.4c01954.s002
Primary Topic
Origins and Evolution of Life
Type
article
Field-Weighted Citation Impact
0.00
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article

A New Route\nto the Prebiotic Synthesis of Glycine\nvia Ab Initio-Based Machine Learning Calculations

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Origins and Evolution of Life
article

A New Route\nto the Prebiotic Synthesis of Glycine\nvia Ab Initio-Based Machine Learning Calculations

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Abstract

In this work, we study the synthesis of glycine, the\nsimplest amino\nacid, using <i>ab initio</i> molecular dynamics and enhanced\nsampling techniques to explore and quantify novel potential pathways.\nOur protocol integrates state-of-the-art machine learning approaches,\nallowing us to sample relevant chemical spaces more efficiently. We\ndiscover a novel “oxyglycolate path”, distinct from\nthe “standard” Strecker mechanism, identify new intermediates,\nand provide a full thermodynamic characterization of all reaction\nsteps. This alternative pathway aligns better with meteoritic and\nexperimental observations, paving the way for further investigations.\nIntegrating quantum accuracy and machine learning in prebiotic chemistry\nrepresents a methodological milestone advancing the exploration of\nlife’s prebiotic origins.

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Origins and Evolution of Life
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