Additional file 1 of Phoenics: a novel statistical approach for longitudinal metabolomic pathway analysis
Supplementary file 1: Figure S1. Positive predictive value (PPV) and sensitivity for the test of the time effect in simulation SimulatedH1_ConditionTime. Figure S2. Percentage of differential metabolites for the time effect in the overlapping pathways in simulation SimulatedH1_ConditionTime. Table S1. Results of the test of the condition effect in simulation SimulatedH1_Condition. Table S2. Results of the test of the time effect in simulation SimulatedH1_Time. Table S3. Results of the test of the condition effect in simulation SimulatedH1_ConditionTime. Table S4. Results of the test of the time effect in simulation SimulatedH1_ConditionTime. Figure S3. Percentage of times the pathway “ABC transporters” is detected positive for the test of the time effect in simulation SimulatedVSize_ConditionTime. Figure S4. Percentage of differential metabolites for the condition effect in the overlapping pathways in simulation SimulatedH1_ConditionTime. Figure S5. Percentage of times the pathway “ABC transporters” is detected positive for the test of the condition effect in simulation SimulatedVSize_ConditionTime. (pdf file).
Institutions
- Université Fédérale de Toulouse Midi-Pyrénées (FR)
- Université de Montpellier (FR)
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR)
- Metabo (Switzerland) (CH)
Publication Details
- Journal
- Figshare
- Published
- 2025-01-01
- DOI
- https://doi.org/10.6084/m9.figshare.28812393.v1
- Primary Topic
- Metabolomics and Mass Spectrometry Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00