<i>De novo</i> assembly and annotation of the <i>Empoasca fabae</i> mitochondrial genome

This study presents the assembly and annotation of the full-length mitochondrial genome for the leafhopper species <i>Empoasca fabae</i> Harris, 1841. The mitogenome was obtained from a contig-level assembly with the identified mitochondrial genome being 14,873 bp in length. The base composition was A (38.8%), T (39.1%), C (11.7%), and G (10.4%). The mitogenome comprised 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and showed a unique, non-AT-rich D-loop region. Phylogenetic analysis confirmed the placement of <i>E. fabae</i> within the subfamily Typhlocybinae, clustering with other species in the <i>Empoasca</i> genus.

Publication Details

Journal
Figshare
Published
2025-01-01
DOI
https://doi.org/10.6084/m9.figshare.28929902.v1
Primary Topic
Genomics and Phylogenetic Studies
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article
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De novo assembly and annotation of the Empoasca fabae mitochondrial genome

Figshare
Genomics and Phylogenetic Studies
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De novo assembly and annotation of the Empoasca fabae mitochondrial genome

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Abstract

This study presents the assembly and annotation of the full-length mitochondrial genome for the leafhopper species <i>Empoasca fabae</i> Harris, 1841. The mitogenome was obtained from a contig-level assembly with the identified mitochondrial genome being 14,873 bp in length. The base composition was A (38.8%), T (39.1%), C (11.7%), and G (10.4%). The mitogenome comprised 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and showed a unique, non-AT-rich D-loop region. Phylogenetic analysis confirmed the placement of <i>E. fabae</i> within the subfamily Typhlocybinae, clustering with other species in the <i>Empoasca</i> genus.

Figshare
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Genomics and Phylogenetic Studies
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<i>De novo</i> assembly and annotation of the <i>Empoasca fabae</i> mitochondrial genome · Figshare (2025) | TGRS Research Map | TGRS